Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00984 ATGGGACACAAAAAGCGAAACTCTGCTCCGCGTTCCAAACAATCTCCGGCGGCTTCTCCGGTGGCGCAATCGCCCATCGGTGGAGCCGCCAATGGTTCCATTTCGCCCGACGTCGATTCCTGCAACGTTTTCGATCAAAATCTACCTAACCCTAACAAGATCGAATTGATTCCATCTCAATCCGAGGGTTCCGATTACTCCACAATTAAGGTAGAATGTGAGCGTGCCCTAACCACCTTTCGTCGTGGTAACCACAAAAGGGCAATGAAGCTCATGAAGGAGTTGTGTTTGAAGGAGGATGGTTCGTCATATTCGGCTTTCGTTTACCGAATTCACGGCTTCATTTGTTTCAAAGTGGCGTCGATTATCACTGATTGTAGCTCGAAGCAACGGCATTTGAAGCACGCCGTCGAATCGGCGCGGAGAGCCGTTGAGCTGTCGCCGAATTCGATTGAGTATGCACATTTTCATGCCAGTGTGATGTTAGAAGCAGCGACTGAGGGGAAAGACTATGAGGAGGTTGTGCACGAGTGTGAGAGAGGGCTTGCCATTGAAAACCCGAATGATCCTGCTAAGGAGACATTGCAGGACGAGAGCGAGCAGAAAGTGTCCACTCTGGAAGATCGGATAACACATGTGCAGAATGAGTTGAGGCAGCTGATTCAGAAGTCAAACATAGCTTCATTGTCTTCTTGGATGAAAAATCTGAGTAATGGGGAGGAGAGGTTTCGGTTGATTCCCATTAGGAGGCCTACGGAGGACCCTATGGAGGTTAGGTTGGTTCAGAGTAGAAGGCCAAATGAGATTAAGAAGGTGACCAAGACGCCCGAGGAAAGGAGAAAAGAGATTGAAGTTCGGGTAGCTGCTGCAAGGCTTTTGCAGCAGAAGTCAGAGTCACCCCAGTCTCCGAATGAAGGAGAGAGGGATGATAGAGCATTGGATTCGTCTTCAGGGTCTGGTCAGAGGATAGGTGATAGGCGAAGGCATATTAGAAAGAATAGCTCCACAGCCGAAAGGAGAGACTGGGTGCTGACTTATTGGAATTCACTGAGTATGGATGTGAAGAAGGACTGGCTTAGGATTGAACTATGTAATCTCATGTCCCACTTTGGGTCTTCAAAGGATACTTTGCCAAAAGATGTTTTATCAGAAGCTTTGTCTTATGCTGAGGCTAATAAAACATGGAAATTTTGGCGTTGCAGCATTTGTGCTGAGAAATTTTCAAATCAAGAATTTCATAGGCAGCATGTTATGCAGCTACACTTGGACAGTCTGTCGCCAAAGATGCAGCGACTTTTGCCTCAAAATATTGACAATGaatggattgagatgattcttaattgttcttggaagcctttggatgtctcagctgcaGTTAAAATGCTTGAGTATAAAGCAAAATCCAAAGGTTCGTCGTTTCGGGAGGATTATCTTACTCAAGACTACAATGATTGTTTTAAAGATTCAAGCAATTCTTACCATGAAAAGGAAAGTTTAGGGTACAATATTGGTAATTCTACAACAGAAAGCAGTAAGTATTATAAAATTGTGGAAAGTGATGTCAGAGAAGGCCTTGAAGACCAACAATTTACAGCAAACCCTGTTCCTGATTGTTGGCCAGTATCTGATGACAAGGAGCGTGCAAAGCTTCTGGAGAAAATCCACGCAGTATTTGAGATACTTATTAGACACAAATGTCTTGCTGCCAGTCATCTTCACAAGGTCATTCAATTTAGTATGGGGGAGATCCAGGGTCTTGCTGCTGGTTCTGAACTTCTAAAACATGATGTAGACCAAACACCAATGTGCATATGCTTTCTGGGAGCTTCACAGCTTAAGAAAATTCTCCAATTTCTGCAGGAAATATCTCATGCTTGTGGGTTGGGTAGATATGCTGATAAAAGTAGTAGTCCCATGAATGATTTGCATGATATCAGTCAAGGTCCTGAAATCAAAGATAAGATTGTTCTCAATGGAGATGCATCATGCCTCCTCCTGGATGAGTGTTTACTACCAACACAAGTCACTCCTGGTACAGCCCACGAGGCTGTCTTCGATGACATGGTCACCTCAAGTTCTCCTGATGGAATTTCACACAATAGCGGTGCTTTGCTATCCTGGCTATATTCAAGTCGGCCTGTTGGGGATCAATTGACGTCATGGATTCGGACCAACGAAGATAAAATACGCCAAGGACAAGAAATGGTCCAGAAACTTGACAAGGAGTTTTTTCAATTAAATGGCCTGTGTGAGAAGAAGTGTGAGCGTATAAGTTATGAGGAAGCGATTCAGACAGTAGAGGATCTTTGTCTTGAAGAAGGTAAAAAGAGGGAAAATGTGAGTGAATTTGTGCAGCGAAGCTATGAGTCTGTCCTAAGAAGGCGGAGAGAAGAGCTTGTTGAGAGTGGGAATGATGTGATGTATGTCAGCAATAGGTTTGAGTTAGATGCTATATCAAGTGTATTGCAAGAAGCAGAATCGATGAATGTTACTACTCAATTTGGCTATGAGGATACTTATGCTGGTGCGACTTCTCAGTTATGTGACTTGGAATCTGGTGAAGATGATGAATGGAGAATGAAGGACTGCTTGCATCAAATGGATGGCTGTATAGAAATGTCTATTCAGAAACTGAAAGAGCACTCATCTATAGAGCTTAGCAAAATTGATGCTGAAATAATTAGAAGTGTTTCCGAGGTGCAGCAATTGGAACTCAATCTTGGGCATGTTTCTGCGAATGATTATCGTGCAATACTAGTGCCTCTAGTGAAGTCGTACATAAAGACACTTTTGGAAGATTTGGCCGAGAAAGATGCAAGGGAGAAATCTGATGCTGCTGGTGAAGCATTTTTGGCCGAACTTGCTCTTGATTCCAAGAAGGTTGGCAAAGGGGGAAATGAGAACACGAGACATGTGGAGAAACCAaaggataagaagaagaataaagatcacaaaaaaacaagaGATTTGAAGGCCACAAGTGGTTCTATGCATCTCTCGCTTCAGTCTACCACTCTTGATTCTAATCTAGTAGCACCTGATAGTGACTATCAAGATCACGAGGTTGCTTCTATGAATGATGATGATTTGGAACACCATGAAGAGGATTTTAGACGTAAAATTGAGCTTGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAACTTCAACGGAGGATTGAAAATGAGGCCAAACAGAAGCACCTCGCTGAGCAACAGAAAAAATTATCTGTCACATGTTCATTAGAGGAAGTGACAGACAAACTTCAAGATTGTCAATTCAAGCCTGTTGCTGATGTCTCAGATGCACACGAAAATGCAAAACTACCTATGCAGGAACAGTTGGCAAAGGATAATGGGTGCCCAAACAATCTGGATGTTTTGCTTGTTACCACAGCAAATGGTTCCATGATGCCAATTAAATCTTCAGCTGATTCAACTTCCCAAAAAATTAATCATTTGCATCAGTCAAAAGTTAAACAAGCAGATTTGCCCAATGGAAATGTTCCAGAGAATGGTCTACCTTTGCCTGATCGGCGTGCAGGAAAAAAACATAAGAGGAATAAGAATTCGTCTAAAATGGTTGATGGAAAGTTGGAATATGTCTCATTGGAAAAGGAGAGTGTTGAGGATACATTCACTGACCATCATTTGAGAGAGCATGCTAAATTTCATAACAACCAAGATGCTAAAAATTTGTTGGAAAACAATGGAGCAAAGGTGATGAAAGAATTGCAAGTGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTGAAATGGCTGTACGCCAAAGCCTGGACACATATCAAGCACGTGGAAATTTGCCTCCAGTTTCGAGTTTGAGAATGCCACAGAGATCTTCCTCACAAGTAGATTGTTCCGGTTTTTCACCTGTGGAAGACTCAACTGAGGATGTGAACGGAGGAGCTACTTTACTTGGTACAGGACTGAGGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATTCAGTCATTGTGGCATGTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGATCAGAGCATGTTCATGTCGGTAATCCATGTGTTGTGTGTGCGCTGTATGAAATATTTACTGCTCTAGACCTTGCTTCAAAGGATTCAAGGAGAGAAGCAGTTGCACCTACATCCCTGCGGATAGCTCTAAGCAACCTATATCCACATAGTAACTTCTTTCAGGAGGCTCAGATGAATGATGCTTCCGAGGTGCTGGCAGTGATATTTGACTGCCTTCATCGATCATTTACTCGTGGTTCAAATGTTACTGATGCAGAATCAGTGGAAAGCAACTGCATGGGGTCTTGGGATTGTGCAGCTGGTAGTTGTATTGCACATTCACTTTTTGGAATGGACATTTTTGAACAAATGAACTGTTACCATTGTGGTCTAGAGTCCAGACATTTGAAGTATACCTCCTTCTTTCACAATATAAATGCCAATGCCCTCAGGACAATGAAGGTTATGTTTCCTGAAAGCTCCTTTGATAAGCTTTTGAATCTTGTGGAGAGGAACCATCAATTGGCTTGTGATCTAGAAGTCGATGGCTGTGGCAAGCTCAACCACATCCATCACTTTCTTTCAACTCCACCCCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGACATAACCGCAACTCTGGCAGCTCTGAGCACCAAGATAGATATCAGTGTCCTTTATCGTGGTTTAGATCCCAAAAGCACCCATAACTTGGTTTCGGTGGTTTGCTACTATGGCCAGCACTATCATTGCTTTGCTTATAGCCATGAGCATGAACAATGGATTATGTATGATGACAAGACTGTGAAGATAATTGGTGGATGGGCCGATGTTCTTACTGTGTGTGAGAGAGGGCATCTACAACCTCAGGTTCTCTTCTTTGAAGCTGTAAACTAG 4950 0.4204 MGHKKRNSAPRSKQSPAASPVAQSPIGGAANGSISPDVDSCNVFDQNLPNPNKIELIPSQSEGSDYSTIKVECERALTTFRRGNHKRAMKLMKELCLKEDGSSYSAFVYRIHGFICFKVASIITDCSSKQRHLKHAVESARRAVELSPNSIEYAHFHASVMLEAATEGKDYEEVVHECERGLAIENPNDPAKETLQDESEQKVSTLEDRITHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRPTEDPMEVRLVQSRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSPNEGERDDRALDSSSGSGQRIGDRRRHIRKNSSTAERRDWVLTYWNSLSMDVKKDWLRIELCNLMSHFGSSKDTLPKDVLSEALSYAEANKTWKFWRCSICAEKFSNQEFHRQHVMQLHLDSLSPKMQRLLPQNIDNEWIEMILNCSWKPLDVSAAVKMLEYKAKSKGSSFREDYLTQDYNDCFKDSSNSYHEKESLGYNIGNSTTESSKYYKIVESDVREGLEDQQFTANPVPDCWPVSDDKERAKLLEKIHAVFEILIRHKCLAASHLHKVIQFSMGEIQGLAAGSELLKHDVDQTPMCICFLGASQLKKILQFLQEISHACGLGRYADKSSSPMNDLHDISQGPEIKDKIVLNGDASCLLLDECLLPTQVTPGTAHEAVFDDMVTSSSPDGISHNSGALLSWLYSSRPVGDQLTSWIRTNEDKIRQGQEMVQKLDKEFFQLNGLCEKKCERISYEEAIQTVEDLCLEEGKKRENVSEFVQRSYESVLRRRREELVESGNDVMYVSNRFELDAISSVLQEAESMNVTTQFGYEDTYAGATSQLCDLESGEDDEWRMKDCLHQMDGCIEMSIQKLKEHSSIELSKIDAEIIRSVSEVQQLELNLGHVSANDYRAILVPLVKSYIKTLLEDLAEKDAREKSDAAGEAFLAELALDSKKVGKGGNENTRHVEKPKDKKKNKDHKKTRDLKATSGSMHLSLQSTTLDSNLVAPDSDYQDHEVASMNDDDLEHHEEDFRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQQKKLSVTCSLEEVTDKLQDCQFKPVADVSDAHENAKLPMQEQLAKDNGCPNNLDVLLVTTANGSMMPIKSSADSTSQKINHLHQSKVKQADLPNGNVPENGLPLPDRRAGKKHKRNKNSSKMVDGKLEYVSLEKESVEDTFTDHHLREHAKFHNNQDAKNLLENNGAKVMKELQVEDEEEERFQADLEMAVRQSLDTYQARGNLPPVSSLRMPQRSSSQVDCSGFSPVEDSTEDVNGGATLLGTGLRNEVGEYNCFLNVIIQSLWHVRRFRVEFLGRSRSEHVHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHRSFTRGSNVTDAESVESNCMGSWDCAAGSCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKVMFPESSFDKLLNLVERNHQLACDLEVDGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTKIDISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHEHEQWIMYDDKTVKIIGGWADVLTVCERGHLQPQVLFFEAVN 1649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00984 1649 Pfam Ubiquitin carboxyl-terminal hydrolase 1317 1624 IPR001394 GO:0004843|GO:0016579
Car07g00984 1649 ProSitePatterns Zinc finger C2H2 type domain signature. 400 421 IPR013087 -
Car07g00984 1649 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1316 1648 IPR028889 -
Car07g00984 1649 Pfam Protein of unknown function (DUF629) 345 873 IPR006865 -
Car07g00984 1649 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1649 - -
Car07g00984 1649 SUPERFAMILY Cysteine proteinases 1316 1646 IPR038765 -
Car07g00984 1649 MobiDBLite consensus disorder prediction 1162 1191 - -
Car07g00984 1649 MobiDBLite consensus disorder prediction 1 38 - -
Car07g00984 1649 Gene3D Tetratricopeptide repeat domain 60 210 IPR011990 GO:0005515
Car07g00984 1649 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1649 - -
Car07g00984 1649 MobiDBLite consensus disorder prediction 961 1013 - -
Car07g00984 1649 MobiDBLite consensus disorder prediction 292 334 - -
Car07g00984 1649 Coils Coil 1033 1073 - -
Car07g00984 1649 Gene3D Cysteine proteinases 1308 1649 - -
Car07g00984 1649 MobiDBLite consensus disorder prediction 11 38 - -
Car07g00984 1649 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Car07g00984 1649 Coils Coil 196 223 - -
Car07g00984 1649 MobiDBLite consensus disorder prediction 993 1012 - -
Car07g00984 1649 CDD Peptidase_C19 1407 1646 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00984 65 1646 C2H2 Transcription Factor Family AT3G47890 54.211 0.0 1634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00984 - - gmx:100799759 2437.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00984 07 8689769 8701765 Car07g00984 07 8689769 8701765 ECH