Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00976 atGGCGGGTGGAAGTGTTTTTACAAATGGTTCGAATATGAATATTTTGCTTCAGAATCAACAAACTCCTCGTGGATACACTTCTCAACCTCTTGATTCTCTTTTCCTTTCTTCTTCTGCTCCTTTCTTTGGTTCAAGATCTATGTTGAGTTTTGAAGATGTTGATGGAGGGAAAAGGTGCAATAGATCATTCTTGAACGGATTCGATATGGACGAAAATGGAGATGATGGAATGGACGAATACTTTCATCAATCAGAGAAGAAACGACGTCTGTCTATAGATCAAGTTCAATTTCTTGAGAAAAGCTTTGAGGTAGAGAACAAGCTTGAACCAGAGAGAAAAACTAAGTTAGCAAAAGACCTTGGTTTGCAGCCACGACAAGTTGCTATTTGGTTTCAAAATCGCCGTGCAAGGTGGAAGACTAAACAGCTTGAGAAGGATTATGAATCTCTTCATCATAGCTACCAGTCTCTTCAGACTGATTATGATAATCTCCTCAAAGAGAAAGATAGGTTAAAGGCTGAGGTGGCAAGGCTAACAGAAAAGGTCGCAAGAGAGAAACAAGAGGGGAAATTAGATGAATCTGAAAGTGAAAAAAATGGATTGAAGGAATCAGTAATGAAAAAGAGTATGGTTGATTCAGTTTCTGAGGGTGAAGGATCCAAAGTGTCAATTGTTGAAGCTTGtaataataataataataataataacaaaataGAAGATATTAGTTCAGCAAGAAGTGACATTTTGGATTGTGAAAGCCCGCGTTATACGGATGGAGTGTTAGTTAGAAATGATGCATTTGAACCCGAATATCAATCGGACATATCACAAGATGAAGAAGAAAACTTGTTGCCTCCTTACATCTTTACAAAACTTGAAGATGTTAATTACTCCAACCCACCTCATACTTCATCTACTTATCAGTTTCAAGAGGAAGAAGATCATCATGCTCTTTGGCCATGGTCTTACTAG 975 0.3733 MAGGSVFTNGSNMNILLQNQQTPRGYTSQPLDSLFLSSSAPFFGSRSMLSFEDVDGGKRCNRSFLNGFDMDENGDDGMDEYFHQSEKKRRLSIDQVQFLEKSFEVENKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYESLHHSYQSLQTDYDNLLKEKDRLKAEVARLTEKVAREKQEGKLDESESEKNGLKESVMKKSMVDSVSEGEGSKVSIVEACNNNNNNNNKIEDISSARSDILDCESPRYTDGVLVRNDAFEPEYQSDISQDEEENLLPPYIFTKLEDVNYSNPPHTSSTYQFQEEEDHHALWPWSY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00976 324 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Car07g00976 324 Gene3D - 137 187 - -
Car07g00976 324 MobiDBLite consensus disorder prediction 184 214 - -
Car07g00976 324 Pfam Homeodomain 87 140 IPR001356 GO:0003677
Car07g00976 324 SUPERFAMILY Homeodomain-like 73 144 IPR009057 -
Car07g00976 324 CDD homeodomain 87 143 IPR001356 GO:0003677
Car07g00976 324 Pfam Homeobox associated leucine zipper 142 183 IPR003106 GO:0006355|GO:0043565
Car07g00976 324 MobiDBLite consensus disorder prediction 184 206 - -
Car07g00976 324 PRINTS Lambda-repressor HTH signature 113 122 IPR000047 GO:0003677
Car07g00976 324 PRINTS Lambda-repressor HTH signature 122 138 IPR000047 GO:0003677
Car07g00976 324 Gene3D - 91 136 - -
Car07g00976 324 SMART HOX_1 85 146 IPR001356 GO:0003677
Car07g00976 324 Coils Coil 148 205 - -
Car07g00976 324 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 16 321 IPR045224 GO:0003700
Car07g00976 324 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Car07g00976 324 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54 16 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00976 Car-Chr7 8590644 8592530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00976 44 189 Homeobox Transcription Factor Family AT3G01470 55.479 1.61e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car07g00976 Homeodomain 4.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00976 - - mtr:MTR_4g107650 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00976 07 8590644 8592530 Car07g00976 07 8590644 8592530 ECH