Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00967 ATGGATTGCAATTCAGGGAGATCTGGTGATGGAGATAGTGGACTCAAAGAAGAGAAAAGAAGTGAACATAGTAATATTGGTGATGATAAAAGTCATCATCATAAGGAAATCATTGTCGAGGAACCACCCGTTGTTAATACACAAAGATCAATGGTAGAAGCTGGACCAAGCGCATCTTCGGCCAAAAATGATAAGGCTGATGATGAGCTTAAGACAACAAAAGCCCAAATGAGTGAAGTGAGAGAAGAAAATGAACGGTTAAAAATGTGCCTGAACAAAATAATGAATGAATACCGAACATTGGAAATGCAATTTCACAATATGGTTAAGCAAGAAACAAAAAAGAACAGTGTTGATGATAACCATAATAAAGAAATAATAGTGGAATCAGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCTAGTAGTAATCCAAGAAATGAAGTTAACAAAGTCTCAAAACTAGCATTGAATAATAATGATGAAGAATTTAAGGAAGAGTTGTCTCTTGGATTGGATTGTAAATTTGAAACATCAAAATCAGGTAGCACAAATGAAGGATTACCAAATATTTCAAGTCCAATAAATAGTTCTGAAGTTCCAACAAAAGAAGAAGAAGGTGGAGAGACTTGGCCACCAAGTAAGACACTGAATAAGATGGTGAGAGATACAGAGGATGAAGTTGTTCAACAAGCGCCTCCTAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGTGATACTCCAACTATGAATGATGGATGCCAATGGAGAAAATATGGACAAAAGATTGCAAAGGGGAATCCATGTCCTCGAGCTTACTATCGTTGTACAGTTGCACCATCATGTCCAGTAAGAAAACAGGTGCAAAGATGTGTTGATGACATATCAATTTTAATCACAACCTATGAAGGAACACACAACCACAACCTTCCTTTATCAGCAACAGCAATGGCTTCCACAACTTCTGCAGCAGCTTCCATGCTATTATCAGGTTCATCAACCTCCAATTCAGCTTCATATTCATCAACACCTTCCAACAACAATCTCCATGGCCTAAACTTTTACCTACCAGATGGTTCAAAATCAAATCAACTATACATATCAAACCCTGCACTTTCATCACAACATTCTCATCCAACTATCACACTTGACCTCACTTCAAATCCATCAAACTCTTCCATTTCATCTCCCTTTGTTAGATTCAATTCAAACTACAATAATAACAACCAAGCAAGATACCCTTCTTCCACAAGTCTGAACTTTAGTTCACCAGAAACAAACACAATGCATTGGAATAATAGCTTCCTCAACTATGCTACACAGAATCAATCATATAACAACAGGAACAATAATCTAAGCACTTTAAACTTTGGTAGACCAAATACAATGGAAAGTATATACCAATCATACATGCAAAAAAACAACAATTCAAACATTTCTCAACATGGTTTACAAGATAGTACTATATCTGCAGCAACAAAAGCAATTACAGCAGATCCAAATTTTCAATCAGCTTTGGCTGCAGCACTTTCTTCACTTATTGGAAATACTCATCAAGGGAATCAGAATCAAAGTGTTGGTGAAAATTTGAGCCAGAAAATGAAATGGGCAGAGATGTTTCCATTTCCAATGTCTTCTTCCACTTCATTGGCTTCTTCAAGTTCTAAAGTGAATGGTTGTGGTTCGAGTTTGTTGAACAAAACGCAGGTTGATGCGCAAATGGGAAGTTTTATGTCATTATCTACAACAAAAAGTGCTTCTGCTTCTCCTGCTGATAATAGTGATAACACCGATTAA 1797 0.3673 MDCNSGRSGDGDSGLKEEKRSEHSNIGDDKSHHHKEIIVEEPPVVNTQRSMVEAGPSASSAKNDKADDELKTTKAQMSEVREENERLKMCLNKIMNEYRTLEMQFHNMVKQETKKNSVDDNHNKEIIVESDLVSLSLGRVPSSNPRNEVNKVSKLALNNNDEEFKEELSLGLDCKFETSKSGSTNEGLPNISSPINSSEVPTKEEEGGETWPPSKTLNKMVRDTEDEVVQQAPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVDDISILITTYEGTHNHNLPLSATAMASTTSAAASMLLSGSSTSNSASYSSTPSNNNLHGLNFYLPDGSKSNQLYISNPALSSQHSHPTITLDLTSNPSNSSISSPFVRFNSNYNNNNQARYPSSTSLNFSSPETNTMHWNNSFLNYATQNQSYNNRNNNLSTLNFGRPNTMESIYQSYMQKNNNSNISQHGLQDSTISAATKAITADPNFQSALAAALSSLIGNTHQGNQNQSVGENLSQKMKWAEMFPFPMSSSTSLASSSSKVNGCGSSLLNKTQVDAQMGSFMSLSTTKSASASPADNSDNTD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00967 598 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00967 598 MobiDBLite consensus disorder prediction 11 40 - -
Car07g00967 598 Coils Coil 63 104 - -
Car07g00967 598 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00967 598 Gene3D WRKY domain 235 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00967 598 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00967 598 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 23 594 - -
Car07g00967 598 MobiDBLite consensus disorder prediction 1 70 - -
Car07g00967 598 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 594 IPR044810 GO:0003700
Car07g00967 598 Pfam WRKY DNA -binding domain 251 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00967 598 MobiDBLite consensus disorder prediction 179 216 - -
Car07g00967 598 MobiDBLite consensus disorder prediction 179 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00967 Car-Chr7 8519868 8524266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00967 77 515 WRKY Transcription Factor Family AT5G15130 42.616 1.39e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g00967 WRKY 2.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00967 - - pvu:PHAVU_003G192000g 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02086 07 25676661 25681282 Car07g00967 07 8519868 8524266 ECH
Car07g00967 07 8519868 8524266 Car07g00967 07 8519868 8524266 ECH