Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00964 atgggtaaatcaccaggaaaatggatcaaaactgtactgtttgggaagaagtcatccaaatcaaCTATACCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAAGAAGGAGTTGTTGCTTCCAAGGTTTCAGAAACTGGTTTGGCTTTAGAGCCAACCTCCAATACTATTGCTGGACACGAGGAAGACCTGGAGCTGGAGAATAAAGAAGCagaaaatgttttatctggaaatcaagtaatcgacacaatagAACCTGTTCATCAAGATGCACCACTTGATCCAGAGAAAATGAAGCTGGAGGAAGCAGCTACAAAAACACAGGCTGCTTTCAGGGGTTATTTGGCTCGGAGAGCATTTAGAGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGCGGGCACTTGGTTAGAAGACAAGCTGTTGTTACGTTATGCTGTATGTATGGAATTGTCAAATTACAAGCAGTTGTTCGTGGCCAAAGAGTTAGAAAATCTGATGTTGGATTTGAAATTCACGAGAAGTGCAATCTCTTGAAGCTTCAGGATGACAAACCTATCAAGCAAGTTGGTATATCTGGTAAAATTTTGAAGCTGTCAGCTAATAATTTCATCCGTAAGCTTATTGCTTCGTCAACTACAATAATGGCACTGCGTTTGCAATATATTCGTGGTGATCCAAATTCTGTCCTAAGTTGGTTGGATCGCTGGTCAGCATCTTGCTTTTGGAAGCCAATTCCCCAACCTAAGAAAATTCGGGATACTAGGTCACAGAAAAAGCAGGGTAATATTTCAACTGGAGAGGCTCAAATGAGTAAGTCAAAACGCACTCACAGGAAGCTTCCTGCTGCGAATTTTGACCTAGCCCCAGCACAAGCAAATCCCGAGTTTGAAAAACCAAGACGGAACATAAGGAAATTTCCAACCCAACCCTCGGATCCTGCGGTGGAAAATCCACAAATTGAGCTTGAGAAGGTTAAACGTAACTTGAGAAAGGTTCATAACCCAGTTGTTGAGACTGCAGTTCTGCCAGAAGCTGAATCTGATACTGCAAAGGCACATTTGGAAAAGGATGCAGTTGCCTCAAGTGTTGCTGTTTCAGAACAAGGGGTCATTAGTTCTAAAGAAATTATCAATAAGGAAGCAACTATATCGATTTCCAGTCAGCCGGATATAGGAATAACTACTGGAGATTTAGCTACTAAGGAGGTGTACAACACCCCTAGCAGTTATCAGGTGAATGTGGAATCAAAGCCCTTAACAGATATTACAAGTAAAGATAAAAACATTTCTGATGATGAAGTGAACAACGACCCTATAGATTTATTAGATACTATTTGCAAAGATGAAAATTCTCACATAACAAATGGAGATTTAAATCACAAGGAAGATCAATCAGGCAGTGAAAATCAGAAACCAAGCCGAAAAGCCTCAATTGTAGCAAAGCAGGAACGAGCAGAGAATGGTTTGCACAATAGTCCGACAATTCCAAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAATTGAGGGCTCAAGGATCACCAAGATTTGGACAAGATGGAAGTGAGAAAAACAACAATGCTCGGCGACATTCTTTGCCATCTTTAACTAACAGCAAAATCACCTCGCACTCTCCTAGGACACAGAGACCAGCTCAGTCAGGTGGTAAAGTGGGCCACAAAAGTGACAAAGCTGTATCATCTTCTAGAGATGGAAATGGAAAGGTAATTCAAGCAGAATGGAAGAGGTGA 1755 0.3892 MGKSPGKWIKTVLFGKKSSKSTIPKGREKLVNQKEGVVASKVSETGLALEPTSNTIAGHEEDLELENKEAENVLSGNQVIDTIEPVHQDAPLDPEKMKLEEAATKTQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKLQAVVRGQRVRKSDVGFEIHEKCNLLKLQDDKPIKQVGISGKILKLSANNFIRKLIASSTTIMALRLQYIRGDPNSVLSWLDRWSASCFWKPIPQPKKIRDTRSQKKQGNISTGEAQMSKSKRTHRKLPAANFDLAPAQANPEFEKPRRNIRKFPTQPSDPAVENPQIELEKVKRNLRKVHNPVVETAVLPEAESDTAKAHLEKDAVASSVAVSEQGVISSKEIINKEATISISSQPDIGITTGDLATKEVYNTPSSYQVNVESKPLTDITSKDKNISDDEVNNDPIDLLDTICKDENSHITNGDLNHKEDQSGSENQKPSRKASIVAKQERAENGLHNSPTIPSYMAATESAKAKLRAQGSPRFGQDGSEKNNNARRHSLPSLTNSKITSHSPRTQRPAQSGGKVGHKSDKAVSSSRDGNGKVIQAEWKR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00964 584 MobiDBLite consensus disorder prediction 454 470 - -
Car07g00964 584 PANTHER IQ-DOMAIN 5-RELATED 1 571 - -
Car07g00964 584 MobiDBLite consensus disorder prediction 519 553 - -
Car07g00964 584 Pfam IQ calmodulin-binding motif 151 165 IPR000048 GO:0005515
Car07g00964 584 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Car07g00964 584 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Car07g00964 584 Gene3D - 97 145 - -
Car07g00964 584 PANTHER PROTEIN IQ-DOMAIN 31 1 571 - -
Car07g00964 584 MobiDBLite consensus disorder prediction 454 584 - -
Car07g00964 584 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Car07g00964 584 MobiDBLite consensus disorder prediction 251 277 - -
Car07g00964 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 165 IPR027417 -
Car07g00964 584 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Car07g00964 584 SMART iq_5 98 120 IPR000048 GO:0005515
Car07g00964 584 SMART iq_5 121 142 IPR000048 GO:0005515
Car07g00964 584 Pfam Protein of unknown function (DUF4005) 483 563 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00964 Car-Chr7 8490820 8495984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00964 1 584 IQD Protein Family AT1G74690 45.617 2.97e-138 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00964 - - gmx:100794636 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00713 02 9428294 9435075 Car07g00964 07 8490820 8495984 ECH
Car07g00964 07 8490820 8495984 Car07g00964 07 8490820 8495984 ECH
Car02g00713 02 9428294 9435075 Car07g00964 07 8490820 8495984 PCT