Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00963 ATGGTTAATGTAAATCATTCCCCTTCCCCTGCTACCTTCTGGACTCAAGCAAACGCACTTCTGAGAAATAATTTAACCTTCCAGAAACGGAACAAGAAGGCGAACATTCGGTTGATTCTATTCCCATTGATCCTTTGCATCTTACTGGTTCTCCTTCAATATGTAATCGACACTCAATTGGATAAACCAAAGTTTAAATGCGGTTGCGAATGTCCTAAGAGCGATATATGTGATGAATCAGAGAAGGTTTGTGGGGTGGAGTATTCCGATGAGACTCAACTTGTTACATGTGCGATTCCTAATCCAACTGAATGGCCTCCTCTCTTGCAACTTTCTCAAGGGAAATGGTATCCAGCTGTTTTTACCACGCTCTTCACCGCCCAAAATCACTCCTTTGGACAGATTGTGTCTAACAATATGTTTCCAAGTAACTTCACCATGGATTTATCTGATATCAAGGGTAGTTTGGCTTTAAATGTGCTGGGATCCGAATCATTGGCCGAGGACAACAATTTTATTGAACCTGCTTTCACTTCGGAGCTTCCCATTTATAATCTACAAACTCAGTGCCCTCAGGACAACATTGCATTCCCAGCTCAGTTCCAGATAGGAGGCGGTAATGAACAGGAAGATACACACACATTTCCAATAGAGATAGGAGGCAGGGCATTGACTAAAGAAATCAAATGTGCCAATGGTATAAATTTATGGCGTAACAGTTCTTCTGATATCAATGATGAGATATATAAAGGTTATCAAAGTGATGACCCAGAAGGACAGATCAATGATATAGTTTCAGCTTTTGATTTTCTAAATTCAAATGAGGATGCATTCAATGTCACTGTATGGTACAAATCAACCTTCAAAGGCAGCAACAATTTTGGTCCTACTCCATTGTTGCGGATTCCTCGTTCCATAAATCTGATATCAAATGCCTACTTACAGTTTCTACGTGGACCCGGTACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAATCTGCAACCCCAATTAAGATTGAGATAGCGTCTCTTCTGGGCAGTCTGTTCTTTACATGGGTCGTTCTGCAACTTTTTCCAGTTGTTCTGACAGCACTGGTTTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCATATGGTTTTTTTCTTGCCTTATCAGTGATCTACATGGTTTGTTTTGTGCTATTTGGCTCAGTCTTAGGATTAAAATTCTTCACGTTGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATGTAAACTTACAAATTTCACTGGCATTTTTGTTGGCTTCCTTTTTTTCAAATGTTAAGACTGCTACAGTAACTGCATATATAAGCGTCTTTGGAACTGGTCTATTAGCTGGCTTTCTTTTCCAATTTTTTATTCAAGATTCATCATTTCCAAGAGGGTGGATCATTTGTATGGAGTTGTATCCTGGGTTTGCTTTGTATCGTGGGTTGTATGAGTTTGCACAGTATGCCGTCAGTGGCAGTCATTCGGGAACTGATGGTATGCGATGGCAGGATCTGAGTGATAGTTCCAATGGCATGAAAGAGGTCTTGATTATCATGTCTGCTGAGTGGATAGTAGTGCTTTTTGTTGCTTATTACATCGATCAAGTATTGTCAACAGGAACTGGAAAAAGTCCTCTTTTCTTCTTGAAAGGATTTCAGAAAAAACATCTTTCACCATTCAAGAAGCCCGGTTTTCAAGAGCAGGGGTCAAAAGTTTTGGCTCAGATGGATAAACCCGATGTCATCCGAGAGAGGGAGAAGGTGGAGCAGCTGCTACTTGAACCAACCCTTAATCATGCAATTGTTTGCGACGACCTAAAAAAATTCTATCCAGGAAGAGATGGAAATCCAGGAAAATTTGCAGTAAAAGAATTATTCCTTGCTGTGCCTAGAGGGGAGTGCTTCGGTATGCTCGGTCCTAATGGTGCCGGGAAGACTTCTTTTATCAGTATGATGATTGGTCTCACAGAGCCAACATCTGGTGCGGCATATGTTGAAGGCCTTGACATAAGAACTCATATGAATGGAATATATACTAACATGGGAGTTTGTCCACAGCATGACTTGCTGTGGGAAACCTTGACTGGTAGAGAGCACCTACTTTTTTATGGAAGACTTAAAAATCTTACAGGTTCAGTCTTGACTCAAGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCCATGGAGGGGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTAATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGAAAATGTTTATGGAATGTTATCAAGCTTGCAAAACAGGATCGTGCAATCATTCTGACAACACATTCTATGGAAGAGGCAGAGGCCTTATGCGATCGATTAGGAGTATTTGTAAATGGTAACTTGCAGTGCATCGGAAATCCAAAGGAGCTAAAAGCCAGATATGGAGGAACTTATGTGTTGACAATGACAACATCTTCGGATCGCGAGAAGGATGTAGAGAACATGGTACAACAGCTCTCTCCAAATGCCAACAAGATATACCGTCTTTCTGGAACTCAGAAATTTGAGCTGCCAAAAGAGGATGTTAAAATAGCAAATGTATTCCAAGCTGTTGAAATTGCAAAAAGAAACTTCACTGTTTTTGCATGGGGTTTAGCAGATACCACATTAGAAGATGTCTTCATTAAGGTAGCACGTGAGGCTCAGGCATCTGATACCTTGTCATAA 2838 0.4024 MVNVNHSPSPATFWTQANALLRNNLTFQKRNKKANIRLILFPLILCILLVLLQYVIDTQLDKPKFKCGCECPKSDICDESEKVCGVEYSDETQLVTCAIPNPTEWPPLLQLSQGKWYPAVFTTLFTAQNHSFGQIVSNNMFPSNFTMDLSDIKGSLALNVLGSESLAEDNNFIEPAFTSELPIYNLQTQCPQDNIAFPAQFQIGGGNEQEDTHTFPIEIGGRALTKEIKCANGINLWRNSSSDINDEIYKGYQSDDPEGQINDIVSAFDFLNSNEDAFNVTVWYKSTFKGSNNFGPTPLLRIPRSINLISNAYLQFLRGPGTKMLFEFVKEMPKSATPIKIEIASLLGSLFFTWVVLQLFPVVLTALVYEKQQKLRIMMKMHGLGDGPYWMISYGFFLALSVIYMVCFVLFGSVLGLKFFTLNDYSIQFVFYFIYVNLQISLAFLLASFFSNVKTATVTAYISVFGTGLLAGFLFQFFIQDSSFPRGWIICMELYPGFALYRGLYEFAQYAVSGSHSGTDGMRWQDLSDSSNGMKEVLIIMSAEWIVVLFVAYYIDQVLSTGTGKSPLFFLKGFQKKHLSPFKKPGFQEQGSKVLAQMDKPDVIREREKVEQLLLEPTLNHAIVCDDLKKFYPGRDGNPGKFAVKELFLAVPRGECFGMLGPNGAGKTSFISMMIGLTEPTSGAAYVEGLDIRTHMNGIYTNMGVCPQHDLLWETLTGREHLLFYGRLKNLTGSVLTQAVEESLKSLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIKLAKQDRAIILTTHSMEEAEALCDRLGVFVNGNLQCIGNPKELKARYGGTYVLTMTTSSDREKDVENMVQQLSPNANKIYRLSGTQKFELPKEDVKIANVFQAVEIAKRNFTVFAWGLADTTLEDVFIKVAREAQASDTLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00963 945 Pfam ABC transporter 646 789 IPR003439 GO:0005524
Car07g00963 945 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 945 - -
Car07g00963 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 851 IPR027417 -
Car07g00963 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 945 IPR026082 GO:0016021|GO:0055085|GO:0140359
Car07g00963 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 860 IPR003439 GO:0005524
Car07g00963 945 CDD ABC_subfamily_A 627 848 - -
Car07g00963 945 SMART AAA_5 653 837 IPR003593 -
Car07g00963 945 Pfam ABC-2 family transporter protein 344 553 - -
Car07g00963 945 Gene3D - 616 890 IPR027417 -
Car07g00963 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00963 Car-Chr7 8481873 8489641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00963 632 847 Calmodulin-binding Proteins AT2G36910 24.434 1.17e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00963 - - gmx:100805474 1361.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00963 07 8481873 8489641 Car07g00963 07 8481873 8489641 ECH