Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00961 ATGGGTAATTGCTTTGGAGCACGTTCCAAGGTTCATAACCCTCTCACCTCCCAACCCAATTCTCGCGATGTTACAAACGTTCCACTTAGAAGCAGTCAATTGTTAGGTCATTCAAGTGCAATAACAGTGCATGGATGTAAACCTGAGATTCTCCCAACTCCAAGATCAGAAGGGGACATACTTTCCTCCCCACATTTAAAAGCCTTCACATTTAAAGATCTTAGGAATGCCACTAGAAATTTCAGTAATGATAGTTTAATTGGACAAGGCGGATTCGGTTACGTCTATAAAGGGTGGATTGATGCTCATTCACTTAGACCTACAAGGCCTGGATCTGGAATTGTTGTTGCTGTCAAGAAGCTTAAGCCTGAAGGTTTTCAAGGCCATAAGGAATGGTTGTCTGAACTTAATTATCTTGGCCAACTGCATCATCCAAATCTTGTCAAACTTATTGGATACTGCCTCGATGGAGATAACCGGCTTCTAGTCTATGAGTACATGCCCAATGGAAGTTTGGAAAATCATCTATTTCGTAAGGGCACACAACTACTTCCTTGGGCAACAAGGATCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACGACTCTAATCAACAAATTATCTACCGCGATTTCAAAGCTTCTAATATTTTAATAGACTCGGAGTTTAATGCAAAACTCTCAGACTTTGGATTGGCCAAAGCAGGGCCCACTGGTGATCGTTCTCATGTTTCTACTCAAGTCCTTGGCACTCAAGGCTATGCTGCTCCTGAATATATTGCTACAGGTTGTCGGCTGACTTCGAGGTGCGATGTCTATAGCTTTGGAGTTGTGCTATTGGAACTGCTATCAGGGAGGCATGCGGTGGATAAAACAAAATCAGGAGTGGAACATAATCTGGTAGATTGGGCAAGACCATATTTGGGTGATAGAAGGAAGTTGTTTCGGATTATGGACACAAAGTTAGAAGGACAGTATCCACAGAGGGCAGCTTATACAGCTGCAATTCTTGCATTACAATGTATTAGTGAGGCCAAGTTTAGACCACAAATGTCTGAGGTTTTGGCTACTTTGGAACAATTGCCAGTCATCAGACATTCAACTAGTCCATCTAGATTAGAGGATAAACCTGTCTCAAGTCCAATGAGATAG 1299 0.3657 MGNCFGARSKVHNPLTSQPNSRDVTNVPLRSSQLLGHSSAITVHGCKPEILPTPRSEGDILSSPHLKAFTFKDLRNATRNFSNDSLIGQGGFGYVYKGWIDAHSLRPTRPGSGIVVAVKKLKPEGFQGHKEWLSELNYLGQLHHPNLVKLIGYCLDGDNRLLVYEYMPNGSLENHLFRKGTQLLPWATRIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDSNQQIIYRDFKASNILIDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTQGYAAPEYIATGCRLTSRCDVYSFGVVLLELLSGRHAVDKTKSGVEHNLVDWARPYLGDRRKLFRIMDTKLEGQYPQRAAYTAAILALQCISEAKFRPQMSEVLATLEQLPVIRHSTSPSRLEDKPVSSPMR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00961 432 Gene3D Phosphorylase Kinase; domain 1 53 166 - -
Car07g00961 432 Coils Coil 190 191 - -
Car07g00961 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Car07g00961 432 ProSiteProfiles Protein kinase domain profile. 81 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00961 432 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
Car07g00961 432 PANTHER OS01G0588500 PROTEIN-RELATED 36 191 - -
Car07g00961 432 PANTHER OS01G0588500 PROTEIN-RELATED 250 422 - -
Car07g00961 432 Gene3D Transferase(Phosphotransferase) domain 1 247 423 - -
Car07g00961 432 SUPERFAMILY Protein kinase-like (PK-like) 254 412 IPR011009 -
Car07g00961 432 Pfam Protein tyrosine and serine/threonine kinase 85 354 IPR001245 GO:0004672|GO:0006468
Car07g00961 432 PANTHER BNAC02G17010D PROTEIN 250 422 - -
Car07g00961 432 SUPERFAMILY Protein kinase-like (PK-like) 58 191 IPR011009 -
Car07g00961 432 PANTHER BNAC02G17010D PROTEIN 36 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00961 Car-Chr7 8474476 8477249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00961 256 422 Receptor kinase-like Gene Family AT3G58690 53.571 1.24e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Car07g00961 PK_Tyr_Ser-Thr 5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00961 - - pvu:PHAVU_003G191400g 315.079