Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00953 ATGGATGGAGGTGATGatctccaccaccatcaccaacaccaacaccatcaccaccaccatcaccaacaacaGCGACAAAACTTCCCATTCCAACTTCTTGAAAAAAATGAAGACCAAGAAGCAGCATCATGTTCAACCTCTTCACCGTACCCATCCTTAGCAATCTCACCAACAGAACCAACCACATCAAATTCAAACCGATCCAACCAACTAGTCTCCGCACCAACAACCTCCTCCGAACCAGGAAACAAAAAACCACCAccaaaacgaacttccaccaaagaccgtcacaccaaagtagaaggccgcggccgccgtatccgaatgccggctctctgcgccgctagagttttccaactaacacgcgaactaggccacaaatccgacggagaaaccatagagtggctcctccaacaagccgaaccagctgtcatagccgccaccggaaccggtacaattccCGCTAACTTCACCTCACTCAACATCTCGCTTCGTAGCTCTGGTTCATCCATGTCGGTGCCTTCTCAGCTAAGATCTTCATATTTCAACCCGAATTTCTCACTTCAACAACGCAGATCACTTTTCCCTGGAATCGGTTTATCATCTTCCGATaacaacagcaacaacaacaCTTCAACGCTCTTAAATTTCCAAACGAATAACCTAACAACAAACATGTTGCAGGCTAAACAGGAGCTTAGAGACggaggaggaggaggaggcggcggCGCACCGTCTTCTTCAACAACATTAGATTTATCAGAAACAAGTGGAGAAGAAAACATGGGAAGAAAAAGAAGACCTAGCGAACAAGATTTaacatcatcaacaacatcacaacaacaaATGGGGAGTTATCTTCTACAGTCAAGTGCAGGTTCAATTCCGGCAAGTCATACTCAGATTCCAGCGAATATATGGATGGTAGCAAATTCAAATAACCACCAAGTAATGAGTGGTGATCCAATTTGGACATTTCCATCTGTGAATAACAGTGCTGCCGCAGCTGCTGCTTTGTATAGAGGAGCGGTTTCAACAAGTGGATTACATTTTATGAATTTTCCACCACCTATGGCTTTATTGCCTGGTCAGCAATTAAGTAATTCATCTCTTGGTGGTAATAGTAGTGGTGGAGGAGGGGGTGGgaatatcaatatgaatatgagtatgaatatgaatatgaatGAAGGACATTTGAGTATGCTTGCTGGTCTTAGTCCTTATCGTCCAGTTTCTCATCATGAATCTCATCAACAAGGAAGTGGATCACAATCACAACGTGGTGGTAGCCATGATCGACATGATAACACAAGTCACCACTCCTAG 1326 0.3122 MDGGDDLHHHHQHQHHHHHHHQQQRQNFPFQLLEKNEDQEAASCSTSSPYPSLAISPTEPTTSNSNRSNQLVSAPTTSSEPGNKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRSLFPGIGLSSSDNNSNNNTSTLLNFQTNNLTTNMLQAKQELRDGGGGGGGGAPSSSTTLDLSETSGEENMGRKRRPSEQDLTSSTTSQQQMGSYLLQSSAGSIPASHTQIPANIWMVANSNNHQVMSGDPIWTFPSVNNSAAAAAALYRGAVSTSGLHFMNFPPPMALLPGQQLSNSSLGGNSSGGGGGGNINMNMSMNMNMNEGHLSMLAGLSPYRPVSHHESHQQGSGSQSQRGGSHDRHDNTSHHS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00953 441 MobiDBLite consensus disorder prediction 412 427 - -
Car07g00953 441 MobiDBLite consensus disorder prediction 232 282 - -
Car07g00953 441 MobiDBLite consensus disorder prediction 25 86 - -
Car07g00953 441 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 440 IPR005333 GO:0003700
Car07g00953 441 MobiDBLite consensus disorder prediction 87 103 - -
Car07g00953 441 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 15 440 - -
Car07g00953 441 MobiDBLite consensus disorder prediction 243 257 - -
Car07g00953 441 Pfam TCP family transcription factor 91 217 IPR017887 -
Car07g00953 441 ProSiteProfiles TCP domain profile. 93 147 IPR017887 -
Car07g00953 441 MobiDBLite consensus disorder prediction 363 389 - -
Car07g00953 441 MobiDBLite consensus disorder prediction 408 441 - -
Car07g00953 441 MobiDBLite consensus disorder prediction 1 103 - -
Car07g00953 441 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00953 Car-Chr7 8410675 8412000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00953 70 379 TCP Transcription Factor Family AT3G47620 46.615 5.18e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car07g00953 TCP 7.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00953 - - cam:101512124 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00953 07 8410675 8412000 Car07g00953 07 8410675 8412000 ECH
Car02g00729 02 9876188 9878001 Car07g00953 07 8410675 8412000 PCT