Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00944 ATGAAAAAACGGCAAGTGGTGGTGGTGGTGAAAACcaacaacaacaacaacaataacaCTTCATCTTCAACGGGAAGGAATATAATTCGATATGGAGAGTGTCAAAAGAATCATGCAGCTTACAGTGGAGGATATGCTGTTGATGGATGTTTGGAGTTTATGGCAAGTTCTTCAGGCGATCAAGGAGCTCTTACTTGTGCTGCTTGTGGTTGTCATAGGAATTTCCATAAAAGAATAGTACAAAGAACAGATTAA 255 0.3647 MKKRQVVVVVKTNNNNNNNTSSSTGRNIIRYGECQKNHAAYSGGYAVDGCLEFMASSSGDQGALTCAACGCHRNFHKRIVQRTD 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00944 84 Pfam ZF-HD protein dimerisation region 29 79 IPR006456 -
Car07g00944 84 PANTHER ZF-HD HOMEOBOX PROTEIN, CYS/HIS-RICH DIMERIZATION DOMAIN-CONTAINING PROTEIN-RELATED 5 81 - -
Car07g00944 84 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 5 81 - -
Car07g00944 84 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 31 79 IPR006456 -
Car07g00944 84 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 30 78 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00944 Car-Chr7 8331433 8331687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00944 1 81 Zinc finger-homeobox gene family AT3G28917 54.118 4.96e-25 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Car07g00944 ZF-HD_dimer 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00944 - - gmx:100794835 103.99