Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00942 ATGGAGACTATGCCACTTATAGGTTGGAATTCTTACACAGATGAAAATCCATTTTCATTTACTACGTACCAATGTTTTCCTTACAGTGGTAACAGTAATGAATATTTCCCAGTGACTTTCCCCAAGGAAGAATTTCCCAACGACAGTTATCTAGATTCTTTTTCTGTTGAGTACTGTAATTACATTCCTGACCCTTACCAATCTCTCTGCATTGAACCAATGTCATCAAGCTTGCAAGATTATGATTTTTATGATGTGGAGAAAGGGTTTTTTGGATGGAGCGAAATCGACGCTGGATTTGAATCAGAGAAAGTGTATTTAAACTTCACTGatgagaaaattgtgaatgaagtgaaagaggaattagtggatgTTAAGTCAGGAGGAGAAGAGAGAAAGTGTAGTAATGCAAAGAATTTATCAAGGAAGATAATATCTCAGTATTTCTATATGCCAATAACACAAGCAGCTAGAGAACTTAATGTGGGGCTCACATTTTTGAAGAAAAGATGTAGGGAATTGGGTATTCGTAGGTGGCCCCACAGGAAGCTCATGAGTTTACAAACATTGATAAATAATTTTCAGGATCAAATGAAAGAGGGGGGGCTAGAGAGTGCAGAAAAGTTGAGGTATGCGATTGATGCATTGGAAAGGGAAAAGAAGGTAGTGGAGGAGATGCCAGATATGCAATTGGAAGATGGTACAAAAAGGCTTAGACAAGCTTGTTTTAAGGCTAATTACAAGAAGAGAAAGCTTATGGAGGATCCCCAGATGTTTTAA 780 0.359 METMPLIGWNSYTDENPFSFTTYQCFPYSGNSNEYFPVTFPKEEFPNDSYLDSFSVEYCNYIPDPYQSLCIEPMSSSLQDYDFYDVEKGFFGWSEIDAGFESEKVYLNFTDEKIVNEVKEELVDVKSGGEERKCSNAKNLSRKIISQYFYMPITQAARELNVGLTFLKKRCRELGIRRWPHRKLMSLQTLINNFQDQMKEGGLESAEKLRYAIDALEREKKVVEEMPDMQLEDGTKRLRQACFKANYKKRKLMEDPQMF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00942 259 PANTHER PROTEIN RKD1-RELATED 54 255 - -
Car07g00942 259 Coils Coil 206 226 - -
Car07g00942 259 PANTHER PROTEIN RKD4 54 255 IPR044607 GO:0003700
Car07g00942 259 Pfam RWP-RK domain 139 187 IPR003035 -
Car07g00942 259 ProSiteProfiles RWP-RK domain profile. 123 207 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00942 Car-Chr7 8321108 8322154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00942 14 251 AtRKD Transcription Factor Family AT1G18790 43.388 1.86e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Car07g00942 RWP-RK 6.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00942 - - cam:101509125 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00942 07 8321108 8322154 Car07g00942 07 8321108 8322154 ECH
Car07g00942 07 8321108 8322154 Car05g00671 05 37695576 37696834 PCT