Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00934 ATGAGGTTACCTTACATTCCACGTTTCTTCCTCCCCAAAACACCACTATTTATGCCCTTCTTTTCCTCTCTTTTTTCCCTTCTCAATCTCAACACAACAACCACCACCTTCACTTTCTCATGTTTTCTAACTCTTATCTCCCTCCATTTCTTCTCTTTTTTTCATACATCACTAACACCTTTTCTCTTCTTTTCTCTTCATTTTATTGAGCTTTTAAGGTTGACCCTTGAAATTATGGAAAACGTTTCTGTTTTATCATGTAAAGAAGATGAGAAGATGGATTTGCCTCCTGGATTTCGATTTCATCCAACTGATGAAGAGCTTATAAGTCATTATTTATACAAAAAGGTTATTGATTCTAATTTCTCTGCAAGAGCAATTGGTGATGTAGACCTTAACAAGTCTGAACCTTGGGATTTGCCATGGAAAGCAAAAATGGGAGAAAAGGAATGGTACTTTTTCTGTGTGAGAGACAGAAAATACCCAACAGGGTTGAGGACAAATAGAGCAACAGAAGCAGGGTATTGGAAAGCTACTGGGAAAGATAAAGAGATTTTCAGAGGGAAATCGTTGGTTGGAATGAAGAAAACTCTTGTTTTTTACAAAGGAAGAGCACCTAAAGGAGAGAAAAGTAATTGGGTTATGCATGAATATAGACTTGAGGGTAAATTCTCTGTTCACAATCTTCCTAAAGCTGCAAAGAATGAGTGGGTTATTTGTAGGGTGTTTCAGAAGAGTTCAGCTGGCAAAAAAACACATATTTCTGGGATAATGAGGTTGGACACTCTTGGTAACGATTTGGGTTCTTCTGTTTTACCACCCCTTACTGATTCATCTCATTCTATTGGGAAAATCAAACAATTGAATGATTCAGCTTACGTGCCCTGCTTCTCCAATTCAATTGATGTTCAAAGAAACCAAGGAGGGATCTTTGATTCTTTCACCAACAACAACTCAATTTATGGTGTTTCTTCAAATCCACTAATATCAACTTCTTCAAATCCACTATACTCTAATAATAATCAAGTTGGGTGTAATTTGCAATTTCCTAGTTCTGTTTGTGGTATGCAGGACCAAGCAATCCTAAGAGCTTTGTATGAAAACAATGGTTTCAAAAGTGAGAGACAGCAAATTGTGAGTGTCTCTAAGGAAACGGATTTAACTACTGATATGAACGCTGAAACATCTTCTGTTGTGTCAAATTTTGATATGAGTAGAAGGGCTTTTGAGAATAATCACCATCGTCCACCACCTGCTGCAGTTGATTTGGATGGTACTTTGTGGAATTACTAA 1293 0.3705 MRLPYIPRFFLPKTPLFMPFFSSLFSLLNLNTTTTTFTFSCFLTLISLHFFSFFHTSLTPFLFFSLHFIELLRLTLEIMENVSVLSCKEDEKMDLPPGFRFHPTDEELISHYLYKKVIDSNFSARAIGDVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFRGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSVHNLPKAAKNEWVICRVFQKSSAGKKTHISGIMRLDTLGNDLGSSVLPPLTDSSHSIGKIKQLNDSAYVPCFSNSIDVQRNQGGIFDSFTNNNSIYGVSSNPLISTSSNPLYSNNNQVGCNLQFPSSVCGMQDQAILRALYENNGFKSERQQIVSVSKETDLTTDMNAETSSVVSNFDMSRRAFENNHHRPPPAAVDLDGTLWNY 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00934 430 ProSiteProfiles NAC domain profile. 95 245 IPR003441 GO:0003677|GO:0006355
Car07g00934 430 SUPERFAMILY NAC domain 92 245 IPR036093 GO:0003677|GO:0006355
Car07g00934 430 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 84 425 - -
Car07g00934 430 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 84 425 - -
Car07g00934 430 Gene3D NAC domain 104 249 IPR036093 GO:0003677|GO:0006355
Car07g00934 430 MobiDBLite consensus disorder prediction 409 430 - -
Car07g00934 430 Pfam No apical meristem (NAM) protein 96 220 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00934 Car-Chr7 8258861 8261210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00934 93 430 NAC Transcription Factor Family AT5G07680 57.817 3.82e-126 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car07g00934 NAM 3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00934 - - cam:101502392 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00934 07 8258861 8261210 Car07g00934 07 8258861 8261210 ECH