Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00931 ATGGAAACTGGACGAAACGAAACACTCTTTTTGGGTTTTCGTTTTGTCTCCAAATTTTTATTATGCGCCATTTCTGGAACTCTCACCGCATGTTTTGCCATTGCCGGGGCCCTCACAGGAGCTATTGCTGGTGCTTTAGCAGCTAAGGCTACCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCTCAGTCGAGGTATTGGAAGCTTCCCGTGCCTACTGGTGTATGGAGCAAACTGGTTCACGTGGCGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGCGGAAGGCTTGTAGAAGAATCGCTTACACCTGCTATTATAACTGCTTACAATTTACAATTTGAGCAGGTTGGAATTACTAATAACAGTGGCTATGATGAGATTCATGATGTTCATAGCTTAGTAGCATCCAGAGGGTTGTCAGGGGATTCATTGAATAAGCTACCGCACCATATGATCTTGAAGGGCATGAAGGCAGAGAATACCTTCTGTGCAATATGTTTGCAGGATATTGAAGTAGGAGAAGTTGCAAGAAGCTTACCTCGTTGTGACCATACATTTCACTTGATATGCGTGGACAAATGGCTTGTCAAGAATGATTCCTGTCCTATTTGCAGACAGAATGTGTAG 651 0.4086 METGRNETLFLGFRFVSKFLLCAISGTLTACFAIAGALTGAIAGALAAKATKXXXXXXXXXXXXXXLSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAIITAYNLQFEQVGITNNSGYDEIHDVHSLVASRGLSGDSLNKLPHHMILKGMKAENTFCAICLQDIEVGEVARSLPRCDHTFHLICVDKWLVKNDSCPICRQNV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00931 216 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 216 IPR013083 -
Car07g00931 216 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 13 215 IPR044523 -
Car07g00931 216 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Car07g00931 216 SUPERFAMILY RING/U-box 152 216 - -
Car07g00931 216 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 13 215 - -
Car07g00931 216 SMART ring_2 171 212 IPR001841 -
Car07g00931 216 ProSiteProfiles Zinc finger RING-type profile. 171 213 IPR001841 -
Car07g00931 216 Pfam Ring finger domain 171 213 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00931 Car-Chr7 8230487 8233628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00931 16 216 C3H Transcription Factor Family AT1G74410 50.980 1.24e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00931 - - gmx:100800105 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00931 07 8230487 8233628 Car07g00931 07 8230487 8233628 ECH