Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00929 ATGGATACTGAGGAACTTATTGATTTGAACAGTAAAGAGAGTAATTTTGGTGGAAATAATAGCAAGAGTGGTGATGGATTCATTGATAGGAGTAAAGTTAGGATTTTGCTGTGTGATAACGATTCCAAGAGTTCAGAAGAGGTTTTCACTCTTCTTGTGAATTGTTCTTATCAGGTTACATGTGTAAGATCGGCAAGGCAAGTGATTGATGCACTGAATGCGGAAGGGCAATATATAGATATCATACTAGCAGAAGTTGACCTTCCGATAAAAAAGGGCATGAAGATGTTAAAGTACGTAGCACACGATAAAGAATTACGCCGAATCCCTATTATAATGATGTCTGCACAAGATGAGGTGTCAATTGTTGTTAAGTGCTTGAGACTAGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGACTTACCGAGAACAACATCTTGAATTATGATTTTGATTTGGTAGCATCAGACCCAAGTGATGCCAATACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAAAGAAGCAATAATCCAGAGGCTGAAATTTCAATCCAACAAGAACAAGAGGCTAGTATTGCCACTGCTGCTGCTGTTATTGAAGAGCTTCCATATACTCATGTATCAGAATATCAGCCTGATGTACCCGGAATTAGTGATCGACGAACAGGTTCTTCAGGACAGCATCCGCCATGCAACAGAGTTACGGATGGACATTTTTCATCAGGTCCAAAGAAAAGTGAACTAAGAATTGGAGAGTCATCAGCCTTTTTCACTTATGTcaaaacaacaacaaccaagaacaacTTTGAAGAGAGTGCTCATGTTGACGATAGTTGTACTTCACAAGTGAGAATGGAAGATATCAATCAAGCATGTCCTCAACAAGGTGGTAATGACCTTAAAAGACACAATGATGGAGAAACGATTTCAAGCCATGTACCAGACGACTTACCCAGCAGCAATAGTATCCCTGATTCTTTATCCATCGAGAGGTCGTGTACCCCTCCTGCATCAATGGAGGTTTCACAGCAAAAGAATTACAAGGAAGAACATCAACAAGGTGTGGTTCATCCAAGAAATGGAGGTTATGGTTCTAGGCTCAACCCACCGGACATGCCTACCCAACATGCTTATCCATATTATATGCCAGGAATTGTTAATCATGTTATGATGCCATCATCGGCACAAATGTATCAAAAGAATATCCAGGACCTTCAAAGTCATCATGTTAGTTCATCTATGATTGCCCAGTACAATCATCTTCCCCAATGTCCACCTCATGCAACTGGGATGACACCCTTCCCATACTATCCAATGAGTATTTGCTTACAAACTGGTCAAGTTTCTACAAATCATTCGTGGCCATCATTAGGAAGTTCAACTTCATGTGAAGCGAACATTAGCAGAGTTGATAGGAGAGAAGCAGCGTTAATGAAGTTTAGACGGAAAAGAAAAGAGCGCTGCTTTGATAAGAAAATTAGATATGTCAATCGGAAACAACTTGCAGAAAGGCGGCCTCGTGTTAGGGGACAGTTTGTCAGAAAGATGAATGGTATTAATGTGGATCTAAATGGACAACCTGCTTCCACCGACTatgatgatgatgatgaagaggaggaagaAAACAATGACCCAAGAGATTCTTGA 1719 0.3938 MDTEELIDLNSKESNFGGNNSKSGDGFIDRSKVRILLCDNDSKSSEEVFTLLVNCSYQVTCVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYVAHDKELRRIPIIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLTENNILNYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSNNPEAEISIQQEQEASIATAAAVIEELPYTHVSEYQPDVPGISDRRTGSSGQHPPCNRVTDGHFSSGPKKSELRIGESSAFFTYVKTTTTKNNFEESAHVDDSCTSQVRMEDINQACPQQGGNDLKRHNDGETISSHVPDDLPSSNSIPDSLSIERSCTPPASMEVSQQKNYKEEHQQGVVHPRNGGYGSRLNPPDMPTQHAYPYYMPGIVNHVMMPSSAQMYQKNIQDLQSHHVSSSMIAQYNHLPQCPPHATGMTPFPYYPMSICLQTGQVSTNHSWPSLGSSTSCEANISRVDRREAALMKFRRKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKMNGINVDLNGQPASTDYDDDDEEEEENNDPRDS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00929 572 SUPERFAMILY CheY-like 31 159 IPR011006 -
Car07g00929 572 Pfam Response regulator receiver domain 35 146 IPR001789 GO:0000160
Car07g00929 572 MobiDBLite consensus disorder prediction 543 572 - -
Car07g00929 572 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 561 - -
Car07g00929 572 MobiDBLite consensus disorder prediction 553 572 - -
Car07g00929 572 MobiDBLite consensus disorder prediction 319 348 - -
Car07g00929 572 MobiDBLite consensus disorder prediction 242 270 - -
Car07g00929 572 ProSiteProfiles Response regulatory domain profile. 34 152 IPR001789 GO:0000160
Car07g00929 572 SMART REC_2 33 148 IPR001789 GO:0000160
Car07g00929 572 Pfam CCT motif 497 539 IPR010402 GO:0005515
Car07g00929 572 Gene3D - 33 233 - -
Car07g00929 572 ProSiteProfiles CCT domain profile. 497 539 IPR010402 GO:0005515
Car07g00929 572 MobiDBLite consensus disorder prediction 182 204 - -
Car07g00929 572 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 561 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00929 Car-Chr7 8214626 8220149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00929 22 558 Response Regulator Gene Family AT5G61380 49.675 5.15e-180 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Car07g00929 Response_reg 3.2e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00929 K12127 - gmx:100786522 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00929 07 8214626 8220149 Car07g00929 07 8214626 8220149 ECH