Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00920 ATGGGTTGTGTGTTTGTGAAGCAAGGTGTGTCAGTGACGCCAGCCGTTGACCACTCTGTTGACTCGGagagaaatgacaagaagaagaaaaataaaaagaGTACTACTGAGTCATTTGGAGCGAGTTGGAGTGAGGTGGATGAGTCAGGGAGAGCGAGTTTGAATTGTGGTAGTGAGTCTTTGAGTTTCAGGTTAGGGAACCTCAGTAAGTATGTGGAAGGTGAACAAGCCGCCGCTGGATGGCCGGCTTGGCTTAGCGCCGTTGCTTCCGAAGCCATTCATGGTTGGGTGCCTCTTCGTGGCGATGCATTTGAGAAACTTGATAAGATTGGGCAGGGTACGTATAGCAGTGTCTTCCGAGCGAAGGAGATTGAGACAGGGAAGATAGTGGCTCTAAAGAAAGTGAGATTTGACAATTTTGAGCCAGAAAGTGTAAGGTTTATGGCACGAGAAATAATGATTCTTAGAAGGCTTGATCATCCCAATATCATTAAATTGGAGGGCTTGATTACTTCAAGATTGTCTTGTAGCATCTACCTTGTATTTGAGTACATGGAGCACGATGTCACGGGACTATTGTCTAGACCGGATATCATATTTAGTGAATCACAGATTAAATGTTACATGAAACAGTTGTTATCTGGTCTTGAGCACTGTCATTCAAGGGGTGTAATGCACCGTGACATCAAAGGATCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTAGCAGATTTTGGATTGGCAAACTTCTCGAATTTCAGTAACAAACAGCCTCTCACTAGTCGTGTTGTCACCTTATGGTACCGTCCTCCGGAACTTTTGCTTGGTTCAACAGATTATGGTGCATCTGTGGATCTTTGGAGTGTTGGTTGTGTATTTGCAGAGCTACTAGTTGGGAAGCCTATACTTAAGGGACGAACAGAGGTAGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCTCCGCCAGAAGAATACTGGAAAAAGACCAAACTTCCTCATGCAACTTTGTTTAAGCCACAGCAACCATATGATAGTTGTCTAAGAGAGACATTTAAAGATTTTCCTGCAACTAGTGTAAATCTGTTACAAACTCTTCTTTCTGTTGAACCAAACAAACGTGGAACTGCCTCATCTGCTCTCTCATTGGAGTATTTCAAAACAAAACCTTATGCATGTGACCCATCAAGCTTACCAGTTTACCCACCTAGCAAAGAGATTGATGCAAAACATGAGGAGGAGTCAAAAAGGAAAAAGATCAGTGGGCGAGTTTGCGGAAATGAAACTAGAAGATCATCAAGAAAGCCAGTAGGACTGAGTAAATTACCCCCAGCAGAGGATTTGACAAGTCAAATTCAAACTTCACAAAAGAGGGATGATAGATCAGCCCACATACTGAAACAAGAGAACACTAAAATAGGTGAGGAGGCACCAAATCCATCAAATAGTAAACCAGAAGATGCAGACGATTCTCATGTGAAGAATGCATCTCAAGTAGAAATTCCCTTTCATGGACCATTACAAGTTTCAAAATCAAGTGGATTTGCATGGGCAAAAAGGCGTAAAGATGACGCTTCAATTAGATCCCACACTCGATCTATTTCTAAAGGACATATATTCAATTCATTAGAAACTTCTACACTAAATTCAAGAAATATTTCTGATAATAGAAACAGTGAAAATAAGGAAATTTTCGGGGAACGCACCAGCTCCAGAGGTCATGATCTATTTGAAATTTCTAAGCTAGTAATGCAAAATCAATGGAATAAGTTTGATCGCCCAGATTCCTTCGATACTTCTGAAGAGTACCACTCACAAGAACTGTCAAAGGTAGTTTATCATAGAGAAGATTCACTGTCCAAGAGAAGTAATAGGAGTTATCAGGAACAAGGGGAGAAAGTTGAATTTTCAGGGCCCCTTCTATCTCAAATGCATACAGTGGATGAGCTCTTAGAAAGACACGAGCGCCACATTCGGCATACAGTTCGAAGATCATGGTTTCAGAGAGGTAAGAAGCATGGGAATTAA 2037 0.408 MGCVFVKQGVSVTPAVDHSVDSERNDKKKKNKKSTTESFGASWSEVDESGRASLNCGSESLSFRLGNLSKYVEGEQAAAGWPAWLSAVASEAIHGWVPLRGDAFEKLDKIGQGTYSSVFRAKEIETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMEHDVTGLLSRPDIIFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANFSNFSNKQPLTSRVVTLWYRPPELLLGSTDYGASVDLWSVGCVFAELLVGKPILKGRTEVVEQLHKIFKLCGSPPEEYWKKTKLPHATLFKPQQPYDSCLRETFKDFPATSVNLLQTLLSVEPNKRGTASSALSLEYFKTKPYACDPSSLPVYPPSKEIDAKHEEESKRKKISGRVCGNETRRSSRKPVGLSKLPPAEDLTSQIQTSQKRDDRSAHILKQENTKIGEEAPNPSNSKPEDADDSHVKNASQVEIPFHGPLQVSKSSGFAWAKRRKDDASIRSHTRSISKGHIFNSLETSTLNSRNISDNRNSENKEIFGERTSSRGHDLFEISKLVMQNQWNKFDRPDSFDTSEEYHSQELSKVVYHREDSLSKRSNRSYQEQGEKVEFSGPLLSQMHTVDELLERHERHIRHTVRRSWFQRGKKHGN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00920 678 SUPERFAMILY Protein kinase-like (PK-like) 98 396 IPR011009 -
Car07g00920 678 MobiDBLite consensus disorder prediction 456 474 - -
Car07g00920 678 ProSiteProfiles Protein kinase domain profile. 104 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00920 678 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Car07g00920 678 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 35 671 - -
Car07g00920 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Car07g00920 678 MobiDBLite consensus disorder prediction 16 41 - -
Car07g00920 678 SMART serkin_6 104 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00920 678 MobiDBLite consensus disorder prediction 400 496 - -
Car07g00920 678 CDD STKc_CDK9_like 104 389 - -
Car07g00920 678 PANTHER CELL DIVISION PROTEIN KINASE 35 671 - -
Car07g00920 678 Pfam Protein kinase domain 104 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00920 678 MobiDBLite consensus disorder prediction 19 35 - -
Car07g00920 678 Gene3D Transferase(Phosphotransferase) domain 1 187 429 - -
Car07g00920 678 MobiDBLite consensus disorder prediction 408 433 - -
Car07g00920 678 Gene3D Phosphorylase Kinase; domain 1 92 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00920 Car-Chr7 8150910 8154714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00920 102 449 Core Cell Cycle Gene Families AT5G10270 49.727 1.60e-112 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Car07g00920 Pkinase 2.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00920 - - gmx:100816047 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00920 07 8150910 8154714 Car05g00718 05 40193703 40201835 ECH
Car07g00920 07 8150910 8154714 Car07g00920 07 8150910 8154714 ECH