Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00916 ATGTCGGACGAAGAGCACCATTTCGAATCCAAGGCCGACGCCGGAGCCTCCAAAACCTACCCTCAACAAGCCGGTACCATCCGTAAAAACGGTTACATCGTCATCAAAAACCGTCCTTGCAAGGTGAGTCTGCTTACTGAAAATGGGAACACTAAGGATGACCTCAAGCTTCCTACCGATGACAGTCTACTCACTCAGGGGAAGAAAAAGGAAGGAAATGCTGCTAAATTTGTCACTAGGAATCATGCTCTCAAGCAGCTTCAAATCAGTCTACCCCTTTTCAGGAAGCTGTGCATTTTGAAAGGTGTAACTCCCCGGGAGCCTAAGAAAAAGTTAGGACGTCAGACTTGCTACCATGTGAAGGATATAAGCTTTCTACATCACGAGCCTTTGCTGGAAATACATAGAGCAATAAGAGTACATGAAAGAAAAATTAAGAAAGCAGAGGCAAAGAAAAACATTGAACGTGCAAAGAGGTTACGTGATAAAACACCCAAACCCAAGTTAGATAGGATTATTCGACAAAGGTACCCAAGATTTGGGGATGCACTTGGAGAATTGGATGGCTGCCTTACAATGGTACATCTTTTTGCAGCATTACCTGCGACTGAGAGCAAAAAAATTGATGTGGAGCGTGTCCATAAATGTCGAAGATTGGCGCATGAATGGCAAGCATACATATCTCGTACTCACAGGTTAAGAAAAACATTTGTATCTGTTAAAGGCATATACTACCAGGCTGAAGTCGAGGGTCAGACAATAACATGGTTAACTCCTCATTCACTGCAGCAGGTTGTGTCTGATGATGTTGACATCCCCACCATGCTTAACTTTCTGCAATTATATGAGGTCATTCATGTACTAATTGGTATGGTAAACTTCTACTTTCTAATGAATTGCTGCAGCCTCTTCTTGCTCGATCCTCGCTTGGAGGCGTTGGCAGCAGATCTATATGCATTGTCAAGATATGCCAATGCCGACAACAGACCCGCAATACTGAGTTCTGAAGCTTCTCAATTAGTTGAATCTGAACAAGGGGGGAACAAGAAAACTGAGGCAGAGACTGAAAATGAAAAATCTGAACTTAGACTTGCTCAACTTCAGAATCAACTTCCGTCTAATGAACCCGGTGCACTAATGCACCTTGTTGAGAAAGCTGCAGGTGATGATGAAGAGGAATATGATCAAGAGACACGAGAATGCAAAAATCTCTTTCGAAATGTCAAAATTTTCTTGAGCAGGGAGGTACCAAGGGAATCATTGCTTCTTGTTATTCCTGCTTTTGGTGGTAAAGTTTCATGGGAGGGAGAGGGGGCTCCTTTTGGGGAATCAGACCAGAGCATTACTCACCAGATCGTTGATCGGGAATCACAAGGACATAGGTTCCTCTCAAGAGAATATGTTCAACCACAGTGGGTATTTGATTGTGTGAATGCACGCATAATTTTGCCAACAGAAAGTTATATGGTTGGAAGAATTCCTCCACCGCACTTGTCCCCGTTCGTTAACTATGACGAAGAAGGGGCATATGTTCCGGAGTATGCAAAGACCATTAAACACTTGCAAGCTGCTGCCAGAAAGGAAGTCCTTCCACTTCCAGGTGTTGAAAAAGATCTCGAAGATCCTCAAAATCTTCTGGCTGACGGTATCATTGATCGAGCAGAGGCTAACGAAGCGGCTAAGAGAAAGCAGAAGATGATGATTCTAGAGAAGCAATACCATGAGGATTTGATGAAAGAACTTCAGGGTGCTACATATACTTCAGCAGGTTCTACTGCTGAAAAAGAAACATCTACTGGATTGATTCAGACAGCTGAATCAACGAACAATGGTCAAGAAAATGTTGATGATTTGACTAAACTTATGATGTCTCGTAAAAAGAGGAAGCTATTAGAAGCCATGCAGATATCGAATGAGCGCAAGCAAGCTAAAAATGATCTTATCAAACACCGGAAAAAGAAAATCGACGAAGCTCAGAATCAAAGGAGTTGA 1992 0.4267 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVSLLTENGNTKDDLKLPTDDSLLTQGKKKEGNAAKFVTRNHALKQLQISLPLFRKLCILKGVTPREPKKKLGRQTCYHVKDISFLHHEPLLEIHRAIRVHERKIKKAEAKKNIERAKRLRDKTPKPKLDRIIRQRYPRFGDALGELDGCLTMVHLFAALPATESKKIDVERVHKCRRLAHEWQAYISRTHRLRKTFVSVKGIYYQAEVEGQTITWLTPHSLQQVVSDDVDIPTMLNFLQLYEVIHVLIGMVNFYFLMNCCSLFLLDPRLEALAADLYALSRYANADNRPAILSSEASQLVESEQGGNKKTEAETENEKSELRLAQLQNQLPSNEPGALMHLVEKAAGDDEEEYDQETRECKNLFRNVKIFLSREVPRESLLLVIPAFGGKVSWEGEGAPFGESDQSITHQIVDRESQGHRFLSREYVQPQWVFDCVNARIILPTESYMVGRIPPPHLSPFVNYDEEGAYVPEYAKTIKHLQAAARKEVLPLPGVEKDLEDPQNLLADGIIDRAEANEAAKRKQKMMILEKQYHEDLMKELQGATYTSAGSTAEKETSTGLIQTAESTNNGQENVDDLTKLMMSRKKRKLLEAMQISNERKQAKNDLIKHRKKKIDEAQNQRS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00916 663 Coils Coil 633 661 - -
Car07g00916 663 MobiDBLite consensus disorder prediction 588 612 - -
Car07g00916 663 PANTHER PESCADILLO - RELATED 68 661 IPR010613 GO:0005730|GO:0042254
Car07g00916 663 MobiDBLite consensus disorder prediction 337 360 - -
Car07g00916 663 ProSiteProfiles BRCT domain profile. 400 490 IPR001357 -
Car07g00916 663 SMART BRCT_7 402 480 IPR001357 -
Car07g00916 663 Pfam BRCT domain, a BRCA1 C-terminus domain 402 489 IPR001357 -
Car07g00916 663 MobiDBLite consensus disorder prediction 634 663 - -
Car07g00916 663 SUPERFAMILY BRCT domain 401 491 IPR036420 -
Car07g00916 663 Coils Coil 348 370 - -
Car07g00916 663 CDD BRCT_pescadillo_like 404 488 - -
Car07g00916 663 MobiDBLite consensus disorder prediction 1 21 - -
Car07g00916 663 Coils Coil 131 160 - -
Car07g00916 663 Hamap Pescadillo homolog [PES1]. 63 660 IPR010613 GO:0005730|GO:0042254
Car07g00916 663 Gene3D BRCT domain 408 481 IPR036420 -
Car07g00916 663 Gene3D - 1 56 IPR014722 -
Car07g00916 663 PANTHER PESCADILLO HOMOLOG 68 661 - -
Car07g00916 663 MobiDBLite consensus disorder prediction 642 663 - -
Car07g00916 663 Pfam Pescadillo N-terminus 68 297 IPR010613 GO:0005730|GO:0042254
Car07g00916 663 SUPERFAMILY Translation proteins SH3-like domain 15 46 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00916 Car-Chr7 8123234 8129837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00916 42 68 Eukaryotic Initiation Factors Gene Family AT1G13950 77.778 8.93e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00916 K14843 - gmx:100819628 909.442