Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00892 ATGGCGTCGGCGAAGCGATGCCACTACGAAGTGCTTGGTGGTATCTCTCGAGATTGCTCACCGGAAGAAATTCGATCAGCTTACCGGAAACTAGCCCTCCAACGCCACCCAGATAAGCTCGTCAAATCAGGTCTCTCTCAAGCCGAAGCCACCGCTCAGTTTCAGGAGCTACAACACGCTTACGAGGTCCTCTCCGATCCAAAGGAACGTGCTTGGTACGACTCTCACCGTTCCCAAATCCTCTTCTCTGATCCTAATTCCCACTCTAATTCCGTCGTCCCTGACCTCTTCTCGTATTTCTCAAACACCGTCTATTCCGGTTACTCAGATTCTGGTAAAGGATTCTACAAAGTTTATTCCGATGTATTCGATAAAATTCAAGCTAATGAGATCAATTTCGCTAAGAAATTAGGTTTAGGAATCGATTCTGTTAGACAGGCTCCTCTTATGGGGAATTTAGATAGTCCCTATGCTCAGGTTACGGCTTTTTATAGTTACTGGTTGGGATTTTCGACAGTTATGGATTTTTGTTGGGCGGATGAGTATGATGCGATGGCCGGTCCAAATCGGAAGTCTCGGCGGTTAATGGAGGAAGAGAATAATAAGGTGAGGAGGAAGGCTAAAAGGGAGTATAATGATACTGTTAGGAAATTGGCTGATTTTGTGAAGAAGAGGGATAAGAGGGTTATTGATATgaaggtgaagaagaatttggagatggagaagaagaaagaggaggagagggagaagaaaatgaagttggagaaggagaagaaggagAGGGCTATGGCTTATGAGGAGCCTGAGTGGGCTAAGGTTGATGAAGAAGAAGTTGAGGATTTGTTTGAGGAGGATGAGTTTGAGGGGAAGAAAGATGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAACCATGAGCAATCCAAGAAGCATAAGGAGAAAGTTGCTCAATTTAGGGATTCACTTgaggatgaagaggaggagttagaagttgaggtggaggaggaaggaggaagtgaaagagaaggagttggagaggagagattggaaagtgaggaggatggaACTGAGGTCAATGAGGATCAAGTTGGAGAGACTGATTGTGGGGTTGATGATTTGGAGGAGAGGATTCGAGATGGTCTTAATGTTGCTGATGAGGAGAATGCACATGGGGTTGAACCAAATGCTgataatgacgatgatgatgaaattttttatgctccacatgcaaatgagggggaggaggctggtgtatcagttgattatgatgataatgatgatgacaacgacaatgatgaaaatggtgttcttgaaacaatgattgctgggcacaagggcagagttgattttgatgagaatgatggtgatggtgatgatgatgacgaAATTGGGGTTCTTGAAGCAATGCTAGCTGGGCGCAAGAGCAGAAAACCCGGTGCATCAAACCCCAAGTCCAAGGCTTCTGTAACTCCAACTCAAATGGAGAATGAGAATGAGAGTGATGATGTTGGTGCAATGGAATATAACAACAGAAAGGTCACAAGAAAGAAACGTAGAGCCAAGAAAGAGAAGGGTGGGAAAAATGGGGATGAATCTCATGTGCCTGCCAATGGCAAATATGAGAATATAAACAGTAATGGAAATGATGATTCTTATGCACAAGAGTCTAGCTCCCAAAATTTCGAAGAAACTGAGGATAATGGTGGTAAAGAGAATGAGCAAATGGGTAGAGATAATAAGAAGATTTCAAATAAACCAGTTGATAAAAAAGCAATTTCAAAGGACACAAAAACCAAAGCAAAAATTTCATCCAAAGGAAGAAAAGCGAAGAATTCTTCGAAGAATCTTGGCCATTTCTGTGAGACATGTGAGGAGGAGTTTGAGTCAAGGAATAAATTACATAAGCATCTGAGTGACTCCGGGCATGCGGCAATAAAAAGTCGATAA 1974 0.3455 MASAKRCHYEVLGGISRDCSPEEIRSAYRKLALQRHPDKLVKSGLSQAEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSHSNSVVPDLFSYFSNTVYSGYSDSGKGFYKVYSDVFDKIQANEINFAKKLGLGIDSVRQAPLMGNLDSPYAQVTAFYSYWLGFSTVMDFCWADEYDAMAGPNRKSRRLMEEENNKVRRKAKREYNDTVRKLADFVKKRDKRVIDMKVKKNLEMEKKKEEEREKKMKLEKEKKERAMAYEEPEWAKVDEEEVEDLFEEDEFEGKKDEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAQFRDSLEDEEEELEVEVEEEGGSEREGVGEERLESEEDGTEVNEDQVGETDCGVDDLEERIRDGLNVADEENAHGVEPNADNDDDDEIFYAPHANEGEEAGVSVDYDDNDDDNDNDENGVLETMIAGHKGRVDFDENDGDGDDDDEIGVLEAMLAGRKSRKPGASNPKSKASVTPTQMENENESDDVGAMEYNNRKVTRKKRRAKKEKGGKNGDESHVPANGKYENINSNGNDDSYAQESSSQNFEETEDNGGKENEQMGRDNKKISNKPVDKKAISKDTKTKAKISSKGRKAKNSSKNLGHFCETCEEEFESRNKLHKHLSDSGHAAIKSR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00892 657 Gene3D DnaJ domain 1 92 IPR036869 -
Car07g00892 657 Coils Coil 230 262 - -
Car07g00892 657 ProSitePatterns Zinc finger C2H2 type domain signature. 298 320 IPR013087 -
Car07g00892 657 SMART ZnF_U1_5 293 327 IPR003604 GO:0003676|GO:0008270
Car07g00892 657 ProSitePatterns Zinc finger C2H2 type domain signature. 629 651 IPR013087 -
Car07g00892 657 ProSiteProfiles Zinc finger C2H2 type domain profile. 296 325 IPR013087 -
Car07g00892 657 MobiDBLite consensus disorder prediction 308 625 - -
Car07g00892 657 ProSiteProfiles Zinc finger C2H2 type domain profile. 627 656 IPR013087 -
Car07g00892 657 CDD DnaJ 7 66 IPR001623 -
Car07g00892 657 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 457 IPR044648 -
Car07g00892 657 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 461 657 IPR044648 -
Car07g00892 657 MobiDBLite consensus disorder prediction 331 349 - -
Car07g00892 657 MobiDBLite consensus disorder prediction 378 404 - -
Car07g00892 657 SMART c2h2final6 627 651 IPR013087 -
Car07g00892 657 SMART c2h2final6 296 320 IPR013087 -
Car07g00892 657 MobiDBLite consensus disorder prediction 358 377 - -
Car07g00892 657 Pfam Zinc-finger double-stranded RNA-binding 296 321 IPR022755 -
Car07g00892 657 Coils Coil 317 348 - -
Car07g00892 657 Pfam DnaJ domain 8 74 IPR001623 -
Car07g00892 657 SMART dnaj_3 6 69 IPR001623 -
Car07g00892 657 MobiDBLite consensus disorder prediction 308 330 - -
Car07g00892 657 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Car07g00892 657 SUPERFAMILY Chaperone J-domain 4 103 IPR036869 -
Car07g00892 657 ProSiteProfiles dnaJ domain profile. 7 77 IPR001623 -
Car07g00892 657 MobiDBLite consensus disorder prediction 547 572 - -
Car07g00892 657 MobiDBLite consensus disorder prediction 573 611 - -
Car07g00892 657 MobiDBLite consensus disorder prediction 426 443 - -
Car07g00892 657 SUPERFAMILY beta-beta-alpha zinc fingers 288 338 IPR036236 -
Car07g00892 657 Gene3D Classic Zinc Finger 286 346 - -
Car07g00892 657 MobiDBLite consensus disorder prediction 490 508 - -
Car07g00892 657 PRINTS DnaJ domain signature 10 28 IPR001623 -
Car07g00892 657 PRINTS DnaJ domain signature 28 43 IPR001623 -
Car07g00892 657 PRINTS DnaJ domain signature 49 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00892 Car-Chr7 7929209 7931994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00892 3 333 C2H2 Transcription Factor Family AT1G74250 73.314 4.92e-162 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car07g00892 DnaJ 4.6e-20 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00892 K09506 - gmx:100788305 767.689