Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00878 ATGATGATAGAAAATTCAAGTGAAAGTTATGAAGCAAAGCAAGAGGGTGGTGATGGAATAATGAAAAGTGAGAAATTAGCAGGAGCAGGTAGTACCTCAAGACAATGGACATCATTAAGAAATCCAAGAATAGTGAGAGTGTCACGTTCTTTAGGAGGAAAAGACAGACATAGCAAAGTTTGTACAATTAGAGGACTGAGAGACCGTAGGATTAGGTTGTCTGTACCAACAGCTATTCAATTATATGATCTTCAAGACAGACTTGGTTTAAGCCAACCTAGTAAAGTTGTTGATTGGTTAATTGAAGCTACTCAATCTGATATTGATAAGTTACCACCACTTGATATTCCTCAATGTTTTACTTCTCACTTTCATCATCATCAATTACCACCACCAGGTACCTCTTTTTCTCTTGGAGGATTTTATGATCAAAATAATGGGATGGCAAAGACAAGGTATAATAATTGGGATATAGATTCATCAGTTGGAAGATTAAAAGGTAAGGAAGCTGAAAATGTGTGTATGGATTCAGAAAAGAGTAAGTTATGGATGAAAAGTACAAATGAACAATTTGGGAGTAATTATTTTTCTAATTCTTCACCATCAGTACATGGTTTATCAAGCTACCATAATTTGGATCCATCAAGTACTTTATCTTTATCCCAATTTGGAAACAGTGGTAATAATATATTTCCTTATTACCATCAACAGGTTGAATCTCATCATAATAGTGGCACTGTTATGCAGTTTTCATCTTCATCTTTCACTAATGGTAATTCACAGTTACTTTTTTGTCCATCATCAGTATCACTTTTTAGTAACAACAACAACTCTCTGGAAACTACTGATAATCATGCAGCAAGACAACATCTTCATCATCAGATATTGAACtcatcgtcgtcgtcattgtcgtcatcttcttcttcttcacatgcacTCATGATGCCTCTCATTCCAACTCTTCATCTTCCAATCAATTCGCCTTTTAGACGCCTTCCGTTACCGTTTAGTTCCAAGCTTCTTGATTCAGATCATGATAATAATAACACCAGAAATGGTTAG 1062 0.3343 MMIENSSESYEAKQEGGDGIMKSEKLAGAGSTSRQWTSLRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIEATQSDIDKLPPLDIPQCFTSHFHHHQLPPPGTSFSLGGFYDQNNGMAKTRYNNWDIDSSVGRLKGKEAENVCMDSEKSKLWMKSTNEQFGSNYFSNSSPSVHGLSSYHNLDPSSTLSLSQFGNSGNNIFPYYHQQVESHHNSGTVMQFSSSSFTNGNSQLLFCPSSVSLFSNNNNSLETTDNHAARQHLHHQILNSSSSSLSSSSSSSHALMMPLIPTLHLPINSPFRRLPLPFSSKLLDSDHDNNNTRNG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00878 353 Pfam TCP family transcription factor 53 146 IPR017887 -
Car07g00878 353 MobiDBLite consensus disorder prediction 1 35 - -
Car07g00878 353 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 2 351 - -
Car07g00878 353 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 351 IPR005333 GO:0003700
Car07g00878 353 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00878 Car-Chr7 7811283 7813118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00878 36 316 TCP Transcription Factor Family AT5G60970 39.672 1.36e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car07g00878 TCP 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00878 - - cam:101510192 699.893