Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00875 ATGAACGGCTTAAGAGGCGAAAGAGCACCTCTCTTGGAGGCTGAGCGCAGTGGAAGGGGAAAGAGACAAGATGATGCCACGGTAGATCAAGTCTCCGACCTTGAACATGGCGATGCAGTGCCGGCTGCAAATGTGGGATTCTTTAGAGTGTTTTCACTTGCAAAACCTGAGGCTGGAAAGTTGGTGATTGCTACCGTAGCTCTGTTAATTGCTGCCACATCAAGTATCTTAGTTCAAAAATTTGGTGGGAAGATAATTGACATTGTATCGGGAGATATCAGAACTCCTGAGGAGAAAGATGCAGCATTAGATGCTGTCAAAAGCACTATACTACAAATCTTTCTGATTGTTGTCCTTGGGTCAGTTTGCTCAGCACTTCGAGCATGGCTTTTTTATTCTGCCAGTGAAAGGGTTGTTGCACGCCTGAGGAAGAATTTGTTCGGTCACCTTGTAAACCAGGAGATAGCCTTCTTTGATGTTACTCGAACCGGGGAACTTTTAAGTAGGCTATCTGAAGATACACAAATCATTAAGAATGCTGCAACTACCAACCTCTCCGAGGCCTTGAGAAATTTGTCAACTGCATTTATCGGTCTCAGCTTCATGTTTGCAACATCATGGAAGTTAACATTGTTGGCTTTGGCTGTTGTACCTGTTATTTCCGTTGCTGTTCGTAAATTTGGTCGTTTCCTGCGTGAACTTTCTCATAAAACTCAAGCTGCAGCAGCAGTAGCTTCTTCGATTGCCGAGGAATCCTTTGGTGCAATAAGAACGGTTAGATCTTTTGCTCAGGAAGATTATGAAATAGAACGCTACTCTGAGAAAGTTAACGAGACTCTAAATCTTGGACTCAAACAAGCTAAAGTTGTTGGACTCTTTTCTGGAGGTCTTAATGCTGCATCTACACTTTCAGTTATTGTAGTTGTTATATATGGAGCTAATTTGACAATCAAGGGTGCCATGACCTCGGGTGATCTTACATCTTTCATTCTTTATAGTCTCTCAGTTGGATCTTCTATATCTGGTTTGTCGGGATTGTATACCGTAGTTATGAAAGCCGCAGGTGCTAGCAGAAGAGTATTTCAACTTATGGATCGTGTCTCATCCATGCCTAAGTCGGGAGAAAAATGTCCTCTGGGTGATCAAGATGGGGAAGTGGAACTAGATGATGTATGGTTTTCATATCCATCACGTCCTAATCATATGGTGCTCAAGGGTATTACAATGAAACTGCAACCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGCGGTGGCGGAAAGACTACAATTGCAAACTTAATTGAAAGATTTTATGACCCAACCAAGGGAAAGATTATGGTGAATGGGGTTCCTCTGGTAGAAATATCACACAAACATTTACACAGAAAGATCAGTATAGTGAGTCAAGAGCCTACACTCTTCAATTGTTCCATAGAGGAGAACATAGCTTATGGATTTGATGGCAAAATTGACGCCGCCGATATTGAAAATGCATCTAAAATGGCCAACGCTCATGAGTTTATATCGAAATTCCCCGAAAAATACAAGACCTTTGTTGGAGAGCGAGGAATAAGGCTTTCAGGAGGACAGAAGCAGAGAATAGCAATTGCTAGAGCCTTGCTTATGGACCCAAAAGTTCTCCTACTGGATGAAGCCACAAGTGCCTTAGATGCCGAAAGCGAATACTTAGTACAGGATGCTATGGATTCTATCATGAAGGGAAGGACAGTTCTAGTCATTGCTCATAGGTTATCAACTGTTAAAACTGCTAATACTGTTGCAGTTGTTTCTGATGGCCAAATAGTCGAGAGTGGTACTCACGACGAGCTTCTCGACAAGAATGGCGTCTATACTGCATTAGTCAGGAGACAACTACAAACAACAAAAACTGAAATCTAA 1899 0.4229 MNGLRGERAPLLEAERSGRGKRQDDATVDQVSDLEHGDAVPAANVGFFRVFSLAKPEAGKLVIATVALLIAATSSILVQKFGGKIIDIVSGDIRTPEEKDAALDAVKSTILQIFLIVVLGSVCSALRAWLFYSASERVVARLRKNLFGHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLSFMFATSWKLTLLALAVVPVISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAQEDYEIERYSEKVNETLNLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGANLTIKGAMTSGDLTSFILYSLSVGSSISGLSGLYTVVMKAAGASRRVFQLMDRVSSMPKSGEKCPLGDQDGEVELDDVWFSYPSRPNHMVLKGITMKLQPGSKVALVGPSGGGKTTIANLIERFYDPTKGKIMVNGVPLVEISHKHLHRKISIVSQEPTLFNCSIEENIAYGFDGKIDAADIENASKMANAHEFISKFPEKYKTFVGERGIRLSGGQKQRIAIARALLMDPKVLLLDEATSALDAESEYLVQDAMDSIMKGRTVLVIAHRLSTVKTANTVAVVSDGQIVESGTHDELLDKNGVYTALVRRQLQTTKTEI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00875 632 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524
Car07g00875 632 MobiDBLite consensus disorder prediction 1 30 - -
Car07g00875 632 PIRSF ABC_prm/ATPase_B 9 632 - -
Car07g00875 632 Pfam ABC transporter 404 554 IPR003439 GO:0005524
Car07g00875 632 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 3 628 - -
Car07g00875 632 SMART AAA_5 413 607 IPR003593 -
Car07g00875 632 CDD ABC_MTABC3_MDL1_MDL2 386 624 - -
Car07g00875 632 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 386 623 IPR003439 GO:0005524
Car07g00875 632 CDD ABC_6TM_AtABCB27_like 64 360 - -
Car07g00875 632 Pfam ABC transporter transmembrane region 61 334 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00875 632 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 352 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Car07g00875 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 624 IPR027417 -
Car07g00875 632 Gene3D ABC transporter type 1, transmembrane domain 112 383 IPR036640 GO:0005524|GO:0016021
Car07g00875 632 MobiDBLite consensus disorder prediction 9 30 - -
Car07g00875 632 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 628 IPR039421 -
Car07g00875 632 SUPERFAMILY ABC transporter transmembrane region 49 366 IPR036640 GO:0005524|GO:0016021
Car07g00875 632 Gene3D - 384 629 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00875 Car-Chr7 7778331 7783125 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00875 47 632 Calmodulin-binding Proteins AT2G36910 33.110 3.60e-93 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00875 - - var:108320153 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00875 07 7778331 7783125 Car07g00875 07 7778331 7783125 ECH