Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00864 ATGGAGCTTTCTCCAGCGCGTCCCTGTGGAGCCGAAGGAGCAGGAAGAAAACCGACGCATGATTTTCTATCACTCTACAGTAATTCAACTGCCGAACAAGATCCAAGGCCATCTGCTCAAGCAAGTTACCTCAAGACCCATGATTTCCTGCGACCACTAGAACAGTTTGAAACGAATTCCGGTGCCAAGGAAGAAGCCACAGATGAAATATCATCGGTGGTTCAGAAGCAACCGACATTACCAGCACCAGCTTCAGTTGAGCGCCTCTTACCTGGAGGAATTGGAACATACAGTATTAGCCACGTTTCCTACGCCAATAATAATAATAATCAAAGAGTTCCAAAGCCAGAAACATCACTTTTCACTGTGCATCAAGCAACTAGTACGGATAGAAACGACAACAACTCCAACTGTAGTTCACATACTTCAAGTGGTTTCACATTGTGGGAAGAGTCTGAGATAAAAAAGGGAAAGATAGGAAAGGAGAATAATGTTGGCGAGAAACCAATTATTGGAGTGGCAGAATCTGCTGCTAAGTTGGGACATTGGACATCGACTGAGCGAACTTCGCAATCGTTTTCTAATAATCGTCATGGCAGCTTCAACTCTCGCTCTTCATCTCTGACAACTGGACAGAAGAACCAGAGTTTTATGGAAATGATGAAATCTGCAAAGGATTGTGCCCAGGATGAAGAGCTAGAAAATGAAGGAACGTTTTTTCTTAAAAGAGAATCCTCGGATACTCAAAGAGGAGATCTGAGGGTGAGAGTGGATGCGAAGAGTACTGATCAAAAGCCAAACACACCGAGATCAAAACATTCTGCAACAGAGCAACGGAGAAGAAGCAAAATTAATGACAGGTTTCAGATGCTACGAGAGCTTATTCCACACAGTGATCAAAAGAGGGACAAAGCGTCCTTTTTGTTAGAGGTCATTGAGTATATTCACTTTTTACAAGAGAAGGTGCACAAGTATGAAGGCTCATTCCAAGGCTGGAATAACGAGCCAGAAAAATTGATGCCATGGAGAAATAATGACAGGCCAGCAGAAAAATTTCAACCTCGTGGCGCAAATAGTGGGTCTAATCCATCTCCAACATTGCTGTTTGCTTCAAAGGTTGATGAGAAAAATATCACAATCCCCCCAACAATTCACGGGGGTATCCATAATGCAGAATCTGGCTTGAGCACAACAACTGCCTTCAAGACAATGGATCATCAGTCTGGAATACTGAACAAGGCTTTTCCAATTCCCATTACTTCCCAACCAAATTTCTTCACTTCGACCCAAACCTGTGGTTCAGGAGGAGTAGTGTCTCAGCTCAGACATAGATTAGCATCTGATGCAGAGAACACCATTTACCAACCTTCAGTAGAATCTCAGGCTATGACTTCTACCAGTGAAAAGCTGAAAGAGAAAGAGCTTAGCATTGAAGGAGGTGCCATTAGCATATCCAGTGTGTACTCACAAGGGTTGTTGGATACACTTACACAAGCCTTGCAGAGTTCGGGAGTGGATTTGTCACAGGCTAACATTTCAGTGCAAATTGAACTTGGTAAGCAAGCTAACATCAGGCCAACTGTACCAATGTCAATGCGCGTTCCTAAGGATGATGAGGATCCTTCTAAGAATCAAAGGAAGATGCGCTCTAGAGTCACTAGCTCTGACAAGTCTGATCAAGCATCAAAGAAGCTTAAGACGTGCAGAAGTTAA 1713 0.4332 MELSPARPCGAEGAGRKPTHDFLSLYSNSTAEQDPRPSAQASYLKTHDFLRPLEQFETNSGAKEEATDEISSVVQKQPTLPAPASVERLLPGGIGTYSISHVSYANNNNNQRVPKPETSLFTVHQATSTDRNDNNSNCSSHTSSGFTLWEESEIKKGKIGKENNVGEKPIIGVAESAAKLGHWTSTERTSQSFSNNRHGSFNSRSSSLTTGQKNQSFMEMMKSAKDCAQDEELENEGTFFLKRESSDTQRGDLRVRVDAKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAEKFQPRGANSGSNPSPTLLFASKVDEKNITIPPTIHGGIHNAESGLSTTTAFKTMDHQSGILNKAFPIPITSQPNFFTSTQTCGSGGVVSQLRHRLASDAENTIYQPSVESQAMTSTSEKLKEKELSIEGGAISISSVYSQGLLDTLTQALQSSGVDLSQANISVQIELGKQANIRPTVPMSMRVPKDDEDPSKNQRKMRSRVTSSDKSDQASKKLKTCRS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00864 570 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 318 IPR011598 GO:0046983
Car07g00864 570 MobiDBLite consensus disorder prediction 525 570 - -
Car07g00864 570 MobiDBLite consensus disorder prediction 239 283 - -
Car07g00864 570 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 339 IPR036638 GO:0046983
Car07g00864 570 MobiDBLite consensus disorder prediction 22 40 - -
Car07g00864 570 Gene3D - 266 339 IPR036638 GO:0046983
Car07g00864 570 Pfam Helix-loop-helix DNA-binding domain 270 319 IPR011598 GO:0046983
Car07g00864 570 MobiDBLite consensus disorder prediction 532 570 - -
Car07g00864 570 MobiDBLite consensus disorder prediction 1 41 - -
Car07g00864 570 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 567 IPR044295 GO:0003700|GO:0006351|GO:0046983
Car07g00864 570 PANTHER TRANSCRIPTION FACTOR BIM1 1 567 - -
Car07g00864 570 CDD bHLH_AtBIM_like 267 343 - -
Car07g00864 570 MobiDBLite consensus disorder prediction 184 212 - -
Car07g00864 570 SMART finulus 274 324 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00864 Car-Chr7 7659260 7667792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00864 1 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 47.135 1.83e-123 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g00864 HLH 5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00864 - - gmx:100808016 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00864 07 7659260 7667792 Car07g00864 07 7659260 7667792 ECH