Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00862 ATGGCAGACGTAACCTTCCTCCGTCACCACCACGAACCCGACGACGACCAAACCCTAATCCCTCTACCATACTGGTCTCCTTCCGATTTCGATCTTGATTTCTACTCTTCCGAACCCGAATTCCCCTCCAACCATCACCATGATTTCTCTCGCGAAAATTTCGTCATGGATCTCTTCCAACAACGCGTCGAGCAATCTCAGGTAATCGATCACACCGATCCAATTCACCAATCGCTAAACGACTCCGTTTTCGATGGTTTAGGTCTCGAATTAGGGTTCGCCCCTgacgacctccacgccgacgacgaagacgaTTTCTTCTTCGACAGGAGGGTTTTGGGATCTGATCCTATCAACGGTTTGCGTATCGTTGAGGTTGAATCGGATTCCGACGCTGAAGATGAATCAGAAGGAAACAATGTCTTTTTCGGGATCTGCGTGCATTCCGATGAAGAAGAGTATCAAAACGAAAACGACGACGTTTCGAGTATTCCTCTCTGTTGGGATTCGCTTCATTTGGAGGATAATAGGGATAACAATTACGAAGATTTTGAGTGGGAGGAAGTTGACGGTGGCGTTGACGAGAGGGAAGTTCTTAGCATGCTCGCCGTCGATGAAAATAGGTCAGTTACTGTTCGCGGTTTTCCGTTAATCGATGAAGAAGAACAAGATTTAGATGAGGTTAACAACATGAGTGTTCATGGAGGATTGGAAAATCATGAGTGGCAAGTGTTGTTGAATTCTCACCTTTTAGAGTATGAAATGATGTTTGGTCAATTTGCTGAGAATGATAATCCTTTAACCGGTAGGCCTCCGGCTTCTGTAACTGTTGTTCAGAACCTTCCGTCGGTGGTTGTGACCAAAGATGATGTGGACAACAACAATGTGCTGTGTGCTGTTTGTAAAGACGAATTTGTTGTTGGAGAAGGGGCTAAGTTGTTGCCATGTTCTCATCGATACCATGGTGATTGCATTGTTCCTTGGTTGGGGATTAGAAATACTTGTCCTGTTTGTCGCTATGAGTTCCCCACCGACGACGCCGATTATGAGCGTAGGAAGGCACAGATATCTGCCCAGAGAATCTGA 1086 0.4429 MADVTFLRHHHEPDDDQTLIPLPYWSPSDFDLDFYSSEPEFPSNHHHDFSRENFVMDLFQQRVEQSQVIDHTDPIHQSLNDSVFDGLGLELGFAPDDLHADDEDDFFFDRRVLGSDPINGLRIVEVESDSDAEDESEGNNVFFGICVHSDEEEYQNENDDVSSIPLCWDSLHLEDNRDNNYEDFEWEEVDGGVDEREVLSMLAVDENRSVTVRGFPLIDEEEQDLDEVNNMSVHGGLENHEWQVLLNSHLLEYEMMFGQFAENDNPLTGRPPASVTVVQNLPSVVVTKDDVDNNNVLCAVCKDEFVVGEGAKLLPCSHRYHGDCIVPWLGIRNTCPVCRYEFPTDDADYERRKAQISAQRI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00862 361 SUPERFAMILY RING/U-box 278 345 - -
Car07g00862 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 259 345 IPR013083 -
Car07g00862 361 ProSiteProfiles Zinc finger RING-type profile. 298 339 IPR001841 -
Car07g00862 361 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 81 355 - -
Car07g00862 361 PANTHER E3 UBIQUITIN-PROTEIN LIGASE CIP8-LIKE ISOFORM X1 81 355 - -
Car07g00862 361 SMART ring_2 298 338 IPR001841 -
Car07g00862 361 Pfam Ring finger domain 298 339 IPR001841 -
Car07g00862 361 CDD RING-H2_RNF126_like 298 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00862 Car-Chr7 7611097 7612257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00862 17 345 C3H Transcription Factor Family AT5G60820 38.693 7.01e-53 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00862 07 7611097 7612257 Car07g00862 07 7611097 7612257 ECH