Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00856 ATGATGCAACTCCAAGACACGCCATCCGCTCTTGGATTTCACATGCCAGCTGAGTGGGAACCCCACTCGCAGTGTTGGATGGGTTGGCCAGAACGCGCAGACAATTGGCGTGACGGTGCTGTTCACGGTCAACGAGTATTTGCCAGCGTGGCATCTGCGATCTCCAGATTTGAGAGAGTAACCGTTTGTGCTAGTTCCGCTCAGTGGGAGATTGCGCGGACCCAGCTACCAGATCATGTCAGAGTTCTCGAGATCAGTGCTAACGATTCGTGGTTTCGTGACATTGGACCCACCTTTGTTGTGAGAAGAGAAACATTGAAATCTGATGATGCTGCGGATAAAATTGCGGGTATTGACTGGAGTTTTAATAGTTGGGGAGGTGTAGAAGATGGATGTTATAGTGATTGGAGTCTTGATACCCATGTAGCTAAGAAGATTTTGGAAGTTGAGAGGATTCCTAGATTTTCACATTCCATGGTGCTTGAAGGCGGAAGCATCCATGTGGACGGAGAAGGAACATGTCTTACCACCGAAGAGTGTCTGTTGAACAAGAATAGGAATCCTTATTTGAGCAAGAACCAAATCGAGGATGAACTTAAGGCATATCTTCAAGTCAGGAAGGTTATATGGTTGCCTCGTGGATTATATGGAGATGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGGCCTGGAGTGGTTCTGCTGTCTTGGACTGATGATGAAACTGATCCTCAGTATGAAAGATCTGTAGAAGCATATTCTTTGCTTTCAAGTGTAACTGATGCTAAAGGTAGAAAATTGGAAGTCATTAAACTCCATGTTCCCAGTCCACTATATATGACGGAGAAAGAGGCTGCTGGGGTTTTCCAGGCTGATGAGGCCAAGCCAAGACTTCCCGGTACTAGGCTTGCTGCTTCCTATGTGAACTTTTACATAGCAAATGGTGCTATTATTGCTCCACAATTTGGAGATAAAAAGTGGGATGATGAAGCTATCCAAGTTCTGTCTAAGGCCTTCCCTCAGCATGAAgttgtggcaattgaagattccagggagattgttttgtcagGATTTATTGTGAGATATCTGAGATTCAATCAGAATTCACAACCCACCGACGTGAAATCAGGGAGGGATAGAGAGAGGAAGAAATGGGTTGCTCGTTCTCTGCTCGGAGAAGGTGGCTTCGCTTACGTTTACCTCGTTAAGGAGCTTCCCAATGAATCTGCTACCGGCGGTCTTGCTAATAAAATCAAAGACTCCTCTCATATCTCCGATGATGGATCTTATGCTATGAAAAAGGTCCTTATTCAGAACAGTGAGCAGCTGGAGTTGGTTAGAGAGGAGATCCGCGTCTCTTCACTGTTTAGTCACCCCAATCTCCTCCCGCTTCTTGATCATGCAATAATTTCTGTTAAGCCTACTCCAGAAACATCTTGGAGCCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAGAAGGAACACTATACTACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTTAAGCACATGCACAGTTTAGATCCTCCATATGCACACAATGATGTCAAACCTGGTAATGTTCTCATAACACACAGAAAAGAACAACCACCACTCGCCATACTGATGGATTTTGGTAGTGCTCGTCCTGCAAGGAAGCAGATTAGCTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCCCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCGTTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATTGTAAACGCTCAGGTCAAATGGCCAGCTGGACTTAAACCTTCATATCCAGAAGCTCTTCATCAGTTTGTTTCATGGATGCTTCAGCCTCAAGCTGCTATGAGGCCCCGGATAGACGATATCATCATCCATGTTGATAAGCTGGTTGCAAAGTTCTCTCAATGA 2112 0.4413 MMQLQDTPSALGFHMPAEWEPHSQCWMGWPERADNWRDGAVHGQRVFASVASAISRFERVTVCASSAQWEIARTQLPDHVRVLEISANDSWFRDIGPTFVVRRETLKSDDAADKIAGIDWSFNSWGGVEDGCYSDWSLDTHVAKKILEVERIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPYLSKNQIEDELKAYLQVRKVIWLPRGLYGDDDTNGHIDNMCCFVRPGVVLLSWTDDETDPQYERSVEAYSLLSSVTDAKGRKLEVIKLHVPSPLYMTEKEAAGVFQADEAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAIQVLSKAFPQHEVVAIEDSREIVLSGFIVRYLRFNQNSQPTDVKSGRDRERKKWVARSLLGEGGFAYVYLVKELPNESATGGLANKIKDSSHISDDGSYAMKKVLIQNSEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTPETSWSHEAYLLFPVHLDGTLLDNAKTMKAKKEHYTTSDVLQIFRQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKEQPPLAILMDFGSARPARKQISSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGLKPSYPEALHQFVSWMLQPQAAMRPRIDDIIIHVDKLVAKFSQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00856 703 SMART serkin_6 389 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00856 703 Gene3D Transferase(Phosphotransferase) domain 1 377 702 - -
Car07g00856 703 SUPERFAMILY Protein kinase-like (PK-like) 385 693 IPR011009 -
Car07g00856 703 PANTHER AGMATINE DEIMINASE 1 371 - -
Car07g00856 703 CDD STKc_16 392 697 - -
Car07g00856 703 Pfam Porphyromonas-type peptidyl-arginine deiminase 14 360 IPR007466 GO:0004668|GO:0009446
Car07g00856 703 Hamap Agmatine deiminase [aguA]. 6 373 IPR017754 GO:0009446|GO:0047632
Car07g00856 703 Gene3D - 2 362 - -
Car07g00856 703 PANTHER AGMATINE DEIMINASE-RELATED 1 371 IPR007466 GO:0004668|GO:0009446
Car07g00856 703 Pfam Protein kinase domain 424 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00856 703 ProSiteProfiles Protein kinase domain profile. 389 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00856 703 TIGRFAM agmatine_aguA: agmatine deiminase 7 361 IPR017754 GO:0009446|GO:0047632
Car07g00856 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Car07g00856 703 SUPERFAMILY Pentein 2 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00856 Car-Chr7 7574879 7585695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00856 386 656 EF-hand Containing Proteins AT4G04710 26.909 1.21e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Car07g00856 PAD_porph 3.8e-116 CL0197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00856 K10536 - gmx:100811750 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00856 07 7574879 7585695 Car07g00856 07 7574879 7585695 ECH