Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00854 ATGGGGAGCGACAGTGAAGGAGAGAAATCGGTGCAAAAAGAGAGAGAGAAGAAGAAGATGCTTGCGTTGTCTCCCATTGCTAAACCTCTTGCTGGGAAGAAGCTTTCTAAGAAAACACTCAAGCTTGTTCGTAGAGCGGCTGAAAACAAGTGCATAAAGAGAGGAGTAAAGGAGGTGGTTAAGAGTATAAGGCGAGGTCAAAAAGGTGTTTGTGTTATAGCTGGTAACATATCGCCAATCGATGTCATCGCTCATGTTCCTGTTTTGTGTGAAGAGGCTGAGATTCCGTATGTATACGTACTATCTAAAGAAGACCTTGCAACCGCAACCGCGGGAGTAACTAAGAGGCCCACTTGTTGTGTTCTAGTGATGACAAAGCCTTCAAAGGGTGAACTAGAACAAGGAGTACAAGAGAAACTAAAATCAGAGTTTGATCAAGTTGCATCCGAAATCACTGAACTTACAACTTCACTGTTTTGA 480 0.4313 MGSDSEGEKSVQKEREKKKMLALSPIAKPLAGKKLSKKTLKLVRRAAENKCIKRGVKEVVKSIRRGQKGVCVIAGNISPIDVIAHVPVLCEEAEIPYVYVLSKEDLATATAGVTKRPTCCVLVMTKPSKGELEQGVQEKLKSEFDQVASEITELTTSLF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00854 159 Gene3D - 17 154 IPR029064 -
Car07g00854 159 SUPERFAMILY L30e-like 18 132 IPR029064 -
Car07g00854 159 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 39 125 IPR004038 -
Car07g00854 159 MobiDBLite consensus disorder prediction 1 20 - -
Car07g00854 159 PRINTS High mobility group-like nuclear protein signature 25 38 IPR002415 GO:0003723|GO:0005730
Car07g00854 159 PRINTS High mobility group-like nuclear protein signature 38 53 IPR002415 GO:0003723|GO:0005730
Car07g00854 159 PRINTS High mobility group-like nuclear protein signature 55 65 IPR002415 GO:0003723|GO:0005730
Car07g00854 159 PRINTS High mobility group-like nuclear protein signature 99 111 IPR002415 GO:0003723|GO:0005730
Car07g00854 159 PRINTS Ribosomal protein L7A/RS6 family signature 52 66 IPR018492 -
Car07g00854 159 PRINTS Ribosomal protein L7A/RS6 family signature 71 84 IPR018492 -
Car07g00854 159 PRINTS Ribosomal protein L7A/RS6 family signature 87 97 IPR018492 -
Car07g00854 159 PRINTS Ribosomal protein L7A/RS6 family signature 97 111 IPR018492 -
Car07g00854 159 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 158 - -
Car07g00854 159 PANTHER - 2 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00854 Car-Chr7 7556346 7558124 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00854 52 150 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 28.000 2.90e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00854 K11129 - gmx:100305515 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00854 07 7556346 7558124 Car07g00854 07 7556346 7558124 ECH