Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00853 ATGTCATTATTGGATAATTTGATCCCTGAAGGGCATAAGGTGCTTATCTTTTCTCAGACTCGCAAGATGCTTAATCTTATTCAGGAATGCATAACATCCAAAGGCTATGATTTTTTACGAATCGATGGCACAACAAAATCCTGTGACAGAATAAAAACTGTTGATGATTTCCAAGATGGTATTGGAGCTCCAATATTTCTGTTGACATCTCAGGTTGGTGGTTTAGGACTGACACTTACAAAAGCAGATCGTGTGATTGTAGTTGATCCTGCTTGGAACCCAAGTACTGATAATCAAAGTGTTGACCGAGCATATCGCATTGGTCAAAAGAAAGATGTAATTGTGTATAGACTGATGACATGCGGAACTGTTGAGGAAAAGATCTATAGGAAGCAGGTATATAAAGGAGGATTATTCAAAACAGTTTCTGAACATAAAGAACAAACTCGGTACTTTTGCCAGCAGGATCTTAGGGAGCTTTTCAGCCTCCCAAAAGAAGGATTTGATGTGTCTGTTACCCAACGGCAATTGGATGAGGAACACGATTGTCAACATACAGTGGATGGCTCTTTCCAAACACATATAGAATTCCTGAAAAGTCAGGGCATAGCTGGAATTAGCCACCACAGTTTGCTGTTTTCCAAGACAGAGCCAGTTCAAGATGGTCCTGAGGATGAAGTAATAAGGACTCATGTACTAAACATATTGGAACTtcatcatcattatcatcttcacatGAGCGAATTGTTGACGGGGCTGAGTTTGCCTTTAATCCGAAGGATGTTAATATACGCAAAAAAGATTCTTCTCCCAGCAGTGCTGGTAAATTGA 831 0.3887 MSLLDNLIPEGHKVLIFSQTRKMLNLIQECITSKGYDFLRIDGTTKSCDRIKTVDDFQDGIGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTCGTVEEKIYRKQVYKGGLFKTVSEHKEQTRYFCQQDLRELFSLPKEGFDVSVTQRQLDEEHDCQHTVDGSFQTHIEFLKSQGIAGISHHSLLFSKTEPVQDGPEDEVIRTHVLNILELHHHYHLHMSELLTGLSLPLIRRMLIYAKKILLPAVLVN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00853 276 Gene3D - 1 201 IPR027417 -
Car07g00853 276 Pfam Helicase conserved C-terminal domain 7 108 IPR001650 -
Car07g00853 276 SMART helicmild6 25 108 IPR001650 -
Car07g00853 276 PANTHER SNF2/RAD54 FAMILY MEMBER 2 236 - -
Car07g00853 276 CDD SF2_C_SNF 1 119 - -
Car07g00853 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 177 IPR027417 -
Car07g00853 276 PANTHER OS04G0692700 PROTEIN 2 236 - -
Car07g00853 276 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 3 158 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00853 Car-Chr7 7552893 7555265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00853 4 135 RAD5 or RAD16-like Gene Family AT5G22750 36.364 1.06e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00853 K20093 - gmx:100779283 402.905