Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00841 ATGGAAAACAAAGAAACCTCAAAACTTGTACACCAAACTGAAAATCAAAACAACCAGAACATTATTTCTTTGATGCCTAACAAAACAGATAAATCCTATGAGACAAGAGAAGAAAAGAAGATTCCAAAAATATCAAACAACAAAAAGTATCTAGGAGTAAGACAAAGACCTTCAGGTAGATGGATAGCTGAGATCAAAGACTCATCACAGAAACTAAGACTATGGTTAGGAACTTTTGACAGAGCAGAAGATGCTGCTCTGGCTTATGATTCTGCTGCAAAGCTTCTTAGAGGAAGAAATGCAAAAACAAATTTTCAAAACAACAAGGGAATCATGAACACTAATCAGGAAGAAGAATACTTCAGAATTTTAGGGAAGAATCCAAGAGCTTATCAACTTCTTAAGCATGCAGTGATGAAGAACCATGCAGTTAATGATGAGATTATGATGAGAGACCAAGTTGTTGAGGAAACAATAGTTTGTTCCATTCCTGATATTGAAGGTTCTGCAGGGTGTAGTGGAATTTCATTTGGAAGTTCTAAGGTTTATTCTTCTGTTTTTGTTGCTCCTTCTTTTAGTGCTTCTCATTGTTAA 594 0.3519 MENKETSKLVHQTENQNNQNIISLMPNKTDKSYETREEKKIPKISNNKKYLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDRAEDAALAYDSAAKLLRGRNAKTNFQNNKGIMNTNQEEEYFRILGKNPRAYQLLKHAVMKNHAVNDEIMMRDQVVEETIVCSIPDIEGSAGCSGISFGSSKVYSSVFVAPSFSASHC 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00841 197 Pfam AP2 domain 49 98 IPR001471 GO:0003700|GO:0006355
Car07g00841 197 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 197 - -
Car07g00841 197 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Car07g00841 197 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Car07g00841 197 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110-LIKE 1 197 - -
Car07g00841 197 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Car07g00841 197 Gene3D AP2/ERF domain 48 107 IPR036955 GO:0003700|GO:0006355
Car07g00841 197 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Car07g00841 197 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Car07g00841 197 CDD AP2 48 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00841 Car-Chr7 7488195 7488930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00841 25 108 AP2-EREBP Transcription Factor Family AT5G19790 55.952 4.48e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g00841 AP2 4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00841 K09286 - gmx:100800716 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00841 07 7488195 7488930 Car07g00841 07 7488195 7488930 ECH