Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00838 ATGGCAGAAGTAGCACAGCATTTCGAGTCGATGACCATGGATGATGCCGCAGCCTTCAAAACTTACCCTCAACAAGCCGGTACCATCCGCAAAAACGGTTACGTGGTTATCAGGGGCCGCCCCTGTAAGGTTGTTGAAGTTGCAACTTCAAAGACAGGGAAGCATGGTCATGCTAAGTGTCACTTTGTTGGGATTGATATCGTCACTGCTGAGAAGCTTGAAGACATCGTCCCTTTTTCCCACAACTGTGATGTTCCACAATTGGTGAATCAAACTGATTGA 282 0.4716 MAEVAQHFESMTMDDAAAFKTYPQQAGTIRKNGYVVIRGRPCKVVEVATSKTGKHGHAKCHFVGIDIVTAEKLEDIVPFSHNCDVPQLVNQTD 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00838 93 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 52 59 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Car07g00838 93 SUPERFAMILY Translation proteins SH3-like domain 18 88 IPR008991 -
Car07g00838 93 Gene3D - 3 87 IPR014722 -
Car07g00838 93 TIGRFAM eIF_5A: translation elongation factor IF5A 20 88 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Car07g00838 93 PANTHER BNAA07G09420D PROTEIN 6 91 - -
Car07g00838 93 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 6 91 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00838 Car-Chr7 7466850 7467736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00838 1 93 Eukaryotic Initiation Factors Gene Family AT1G13950 75.269 1.47e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00838 K03263 K02180 gmx:100499632 149.058