Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00835 ATGCGCGTGGTTGAAGGTAATGGTAAACGCGGTTTGGGTAGTGTGTGTTGCCCTAATCGCATGCGAGCGAGAACTTGTTCTCTTATCCTCTCAAACCTTCTTCATAAATTCATATATCAACAACCATGTTTCCCCTCATCTTTATCTTCACGCATCTCCGATCTTCAATTGTCACTCGTTTCTGGTTCAATCATGGAACCCATGGATATCGTTGGGAAATCGAAGGAAGATGCTTCGCTTCCTAAAGCTACAATGACAAAAATAATTAAAGAGATGTTACCTCCAGATGTACGCGTTGCAAGAGATGCTCAAGATCTGTTGATTGAGTGTTGTGTAGAATTTATAAATCTCATCTCATCAGAATCCAATGAAGTCTGTAACAGAGAGGACAAACGAACTATTGCACCTGAGCACGTATTAAAGGCTCTACAGGTATGTCCACTTTTTATATAG 453 0.4062 MRVVEGNGKRGLGSVCCPNRMRARTCSLILSNLLHKFIYQQPCFPSSLSSRISDLQLSLVSGSIMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREDKRTIAPEHVLKALQVCPLFI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00835 150 Gene3D Histone, subunit A 70 149 IPR009072 GO:0046982
Car07g00835 150 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 78 143 IPR003958 -
Car07g00835 150 PANTHER PROTEIN DR1 HOMOLOG 65 146 IPR044255 -
Car07g00835 150 PANTHER PROTEIN DR1 HOMOLOG 65 146 - -
Car07g00835 150 SUPERFAMILY Histone-fold 76 144 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00835 Car-Chr7 7428657 7433173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00835 65 145 CCAAT-DR1 Transcription Factor Family AT5G08190 96.296 1.20e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Car07g00835 CBFD_NFYB_HMF 3.4e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00835 K21751 - gmx:100798439 161.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00835 07 7428657 7433173 Car07g00835 07 7428657 7433173 ECH