Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00832 ATGGAGAAGTTCCTGTGCGAGTTGCTATTAGACTCCAACCAACCCATCTCTGAGCGTTTCAGAGCCCTCTTTTCTCTTCGAAACCTCAAAGGTTCCGCCCCTCGCGCCGCTCTTGTTCTCGCAACCAGAGATTCATCTAATTTGTTGGCACACGAAGCTGCATTTGCATTAGGTCAAATGCAAGAATTGGAAGCCATCCCTGCATTGACCTCTGTTCTTAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCTGAAGCACTTGGTGCTATTGGTTCAGAGAGTAACGTTTCTCTGTTGAAGCATAGCTTGGATTCTGATCCGGCTCAAGAGGTTCGAGAAACATGTGAATTGGCTCTTCAACGTATTCTGAATTTAAAAAATGCTGATGATATTACTGGTGATTTGACTGCACCCGGTATATCTCCCTTTAAGTCTGTTGATCCTGCAGCGCCGGCCACATCTTGTTCTTCAGTTAATCAACTAAGGGAGTTACTTCTCGATGAGGAAAAAGGGATGTATGAACGCTATGCGGCTCTGTTTGCACTTCGAAATGATGGTGGAAATGATGCTGTTGCTGCTATTATTGATTCCTTGGGTTCAAAGAGTGCTTTACTGAAACACGAGGTTGCTTATGTTTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGAGATGTGAATGAGCACCCAATGGTTAGACACGAGGCTGCTGAAGCTCTTGGCTCAATTGCAGATGAACAAAGTGTAGCCCTTCTTGAGAAGTTTACGGCAGACCCAGAGCCTCTCGTCGCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAACAATCAGGGAAATCGTTTGAGTTCCTGTTCATGCGCAATCCAATTTTCTGGGTACCGAATATCTTAGGACCTGTCCCGAAGAAGAGGACAGGGATTGAAACTGCCCTAAATTGTATCATGGCAGAATCAGAAAACAACCTCCAACCTTCTTCACCACCAATGGATGAAACCAATAACAAGAATAAAAAGACAAAGAAGAAGCACGATAAAAAGAGACCCCGTGATATTGCTGAGGAGAAGCACGTAGAACAAGAAGAAGAGAATGGGAACAATAATATTAGTAATGAAGAATCCTCGAAAAAGAAGAAGAAAAAGAAGGAGGTTGAAATAGAAATTGAAGTGGAAGAGACAAAGGTGAAGAACAACAGTGGTTCTGGAATTATGAGCACTGAATCATTTGCTTCTCTCGAATTATCTCAACCTACTTTTAACTCCATCATGGATATGGGATTTCAACACATGACTCAGATTCAAGCAAGATCAATTCCACCACTTCTGAGTGGAAAGGATGTTCTTGGTGCTGCAAGGACTGCGGGTGTTATTGTCATATGCCCTACTAGAGAGCTTGCTATTCAGACTCATGATGTTGCCCAGAAGCTTCTAAAGTATCATTCACAAACTCTTGGATTGGTTATTGGAGGTTCAGCTAGAAGAACCGAAGCTGAACACATTGCTAAAGGGATAAATATATTGGTAGCTACTCCTGGCCGTCTTCTGGATCATCTACAAAATACAAAGAGATTTATATATAATAACCTGAAGTGCCTCATTATTGACGAAGCAGACAGGATATTGGAAGCAAACTTTGAGGATGAATTGAGGCAGATTATCAAGATCCTACCAAAGGACAGACAAACGGCTTTATTTTCAGCTACACAGACAAAGAAGGTCGAAGATCTTGCTCGCCTGTCATTTCAGACGGCTCCTATCTATATTGATGTAGATGATGGGAGAAAGAAGGTCACAAATGAAGGGTTGCTTCAGGGTTATGTGGTTGTTCCCTGTGCCAAGCGATTTATGGTTCTCTATTCCTTCTTGAAGAGACATCGATCAAAAAAAGTTATGGTCTTTTTCTCTTCATGCAACAGTGTCAAATTCCATGCAGACGTTCTTAATCACATTAATTTAGACTGTTCAAGTATTCATGGAAAACAAAAGCAGCAAACCCGGACAACTACTTTCACTGACTTCTGCAAAGCAGAAAAGGGGGTCTTGCTCTGTACTGATGTTGCTGCTCGTGGACTGGACATACCTGATGTGGACTGGATTTTGCAGTATGATCCTCCTGATGAACCAAAGGAATATATCCACAGGGTTGGTAGAACAGCTCGTGGGGAAGGGGGAAAAGGCAATGCTTTACTTTTCCTGATTCCTGAAGAATTGCTATTTCTTCGCCTTCTGAAGGAAGCCAAGGTTCCTGTGAAAGAATATGCTTATGATGAAAAGAAGGTGGCAAATGTACAGTCTCACATGGAAAATTTGATTACCAATGAGTATTATTTGAACAAAATGGCTAAAGAAGCATATAGATCATACATATTAGCATACAATTCACATTCCATGAAGGATATATTCTGTGTTCAACGCCTTGATATGCAGGCTGTTGCTGCTTCATTCTGTTTAACAAACCCTCCAAATGTGACTGTAAACATAAACAGCAGTAAGCAAAGGAATAAATCGCGTAAAGTTGAAAATAGAAATGGATTCAGCCACAACAATCCTTATGGAAAGGGACTTGGTAATGACAAGCGGCAGTTTGTGAGGGAGAGCTGGATTAGGTGGGCTGATCATAAAGGAGCACTCTTTAGTGGTAGTGGATAG 2679 0.4181 MEKFLCELLLDSNQPISERFRALFSLRNLKGSAPRAALVLATRDSSNLLAHEAAFALGQMQELEAIPALTSVLNDLSLHPIVRHEAAEALGAIGSESNVSLLKHSLDSDPAQEVRETCELALQRILNLKNADDITGDLTAPGISPFKSVDPAAPATSCSSVNQLRELLLDEEKGMYERYAALFALRNDGGNDAVAAIIDSLGSKSALLKHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADEQSVALLEKFTADPEPLVAQSCQVALSMLEFEQSGKSFEFLFMRNPIFWVPNILGPVPKKRTGIETALNCIMAESENNLQPSSPPMDETNNKNKKTKKKHDKKRPRDIAEEKHVEQEEENGNNNISNEESSKKKKKKKEVEIEIEVEETKVKNNSGSGIMSTESFASLELSQPTFNSIMDMGFQHMTQIQARSIPPLLSGKDVLGAARTAGVIVICPTRELAIQTHDVAQKLLKYHSQTLGLVIGGSARRTEAEHIAKGINILVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELRQIIKILPKDRQTALFSATQTKKVEDLARLSFQTAPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHRSKKVMVFFSSCNSVKFHADVLNHINLDCSSIHGKQKQQTRTTTFTDFCKAEKGVLLCTDVAARGLDIPDVDWILQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELLFLRLLKEAKVPVKEYAYDEKKVANVQSHMENLITNEYYLNKMAKEAYRSYILAYNSHSMKDIFCVQRLDMQAVAASFCLTNPPNVTVNINSSKQRNKSRKVENRNGFSHNNPYGKGLGNDKRQFVRESWIRWADHKGALFSGSG 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00832 892 SMART ultradead3 436 615 IPR014001 -
Car07g00832 892 Pfam Domain of unknown function (DUF4217) 773 833 IPR025313 -
Car07g00832 892 PANTHER RNA HELICASE 464 867 - -
Car07g00832 892 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 417 445 IPR014014 GO:0003724
Car07g00832 892 Pfam DEAD/DEAH box helicase 465 586 IPR011545 GO:0003676|GO:0005524
Car07g00832 892 Coils Coil 111 131 - -
Car07g00832 892 SMART helicmild6 651 732 IPR001650 -
Car07g00832 892 Pfam PBS lyase HEAT-like repeat 241 264 IPR004155 -
Car07g00832 892 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 401 597 IPR014001 -
Car07g00832 892 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 51 383 464 - -
Car07g00832 892 PANTHER RNA HELICASE 383 464 - -
Car07g00832 892 Hamap Deoxyhypusine hydroxylase [DOHH]. 2 293 IPR027517 GO:0008612|GO:0019135
Car07g00832 892 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 543 551 IPR000629 -
Car07g00832 892 Pfam HEAT repeats 40 122 - -
Car07g00832 892 SUPERFAMILY ARM repeat 48 282 IPR016024 -
Car07g00832 892 MobiDBLite consensus disorder prediction 838 867 - -
Car07g00832 892 MobiDBLite consensus disorder prediction 357 373 - -
Car07g00832 892 Gene3D - 147 292 IPR011989 -
Car07g00832 892 Gene3D - 3 134 IPR011989 -
Car07g00832 892 Gene3D - 462 608 IPR027417 -
Car07g00832 892 Gene3D - 612 854 IPR027417 -
Car07g00832 892 SMART E-Z type HEAT repeats 16 45 IPR004155 -
Car07g00832 892 SMART E-Z type HEAT repeats 80 109 IPR004155 -
Car07g00832 892 SMART E-Z type HEAT repeats 47 76 IPR004155 -
Car07g00832 892 SMART E-Z type HEAT repeats 206 235 IPR004155 -
Car07g00832 892 SMART E-Z type HEAT repeats 239 268 IPR004155 -
Car07g00832 892 SMART E-Z type HEAT repeats 175 204 IPR004155 -
Car07g00832 892 Gene3D - 358 461 IPR027417 -
Car07g00832 892 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 51 464 867 - -
Car07g00832 892 CDD SF2_C_DEAD 612 742 - -
Car07g00832 892 Pfam Helicase conserved C-terminal domain 627 731 IPR001650 -
Car07g00832 892 SMART DUF4217_3 772 835 IPR025313 -
Car07g00832 892 MobiDBLite consensus disorder prediction 329 393 - -
Car07g00832 892 MobiDBLite consensus disorder prediction 329 343 - -
Car07g00832 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 753 IPR027417 -
Car07g00832 892 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 624 781 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00832 Car-Chr7 7393937 7409267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00832 417 751 Eukaryotic Initiation Factors Gene Family AT3G13920 30.556 1.45e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00832 K13179 - gmx:100798885 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00832 07 7393937 7409267 Car07g00832 07 7393937 7409267 ECH