Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00821 ATGTATTCATCAAACAGTTCCCTCAATGGAAATAACAATAACCTAACAGGAACATCATTTTGTTCATCTACACCTTTTACTTTTGAAAGCAACtcatcatcatcaacttcaaaacatcatcaAAACACTTGTTTTCCACCCTCACCTTTCTCTTTCATTCAATTCCCTTATGACACTTTTGAAGACAATAATCAAATCTTCCTCCTCCAAGAACAAGATGATCACATTCAGATGAATGTTaaaaacaaagaagaagaagaagataaaggaaaaACAGTACTAGTAGTGGTTGATGAGCATAAGAAGAATGTTCAAAGAAAAAGATCCAGCAAGAGAGATCGACACAGTAAGATCAAAACGGCAAAAGGATTAAGAGATCGGAGAATGAGATTGTCTCTTGATGTAGCAAAGAAGTTTTTTGGTCTTCAAGATATGTTAGGATTTGAGAAAGCAAGCAAAACAGTTGAATGGTTACTCAACAAATCAAAACTTGAAATCAAACAGCTTGCAAGAGAAAAGAATCTTCAGAATGATTCTTCATCAACAACTTCAGAATGTGAAGAAGGTGTTTCAAGTTTGGATAATAATGATCATCAACAACAACAAAAAATCATGCTTGTAAAGAGATCATCATCAACAAACAAAGTTTCTAGAAAGAGTGCATTCAATTGTATTGGaagggaaaaagcaagagaaagagcaagagaaagaacaagacaaaagTTGAATGCTAGAATAAGAGATGTTAATATTGTTGATCAATCAAATTCAAAGCAATGTGTtaataataataataataataataatTGGAACCCTTTTGAAGAATGTGCAGTGAATAATAGTTCCTTTGATGTGAAGATGATTAATCATGAAGCAAAGGAACATTCAGAATTAGAGGATGAAGAAAATTCCTTGTTCATTAATATGACCAAATGGAGTCCAACTTTCATGTTCAATAACTCATCAATCCTACAACAACATCATCAATATGCACAATTTCAATGTTTGGAAAAACCTTGGGAGGACTACAACAACACCATCTAA 1044 0.2931 MYSSNSSLNGNNNNLTGTSFCSSTPFTFESNSSSSTSKHHQNTCFPPSPFSFIQFPYDTFEDNNQIFLLQEQDDHIQMNVKNKEEEEDKGKTVLVVVDEHKKNVQRKRSSKRDRHSKIKTAKGLRDRRMRLSLDVAKKFFGLQDMLGFEKASKTVEWLLNKSKLEIKQLAREKNLQNDSSSTTSECEEGVSSLDNNDHQQQQKIMLVKRSSSTNKVSRKSAFNCIGREKARERARERTRQKLNARIRDVNIVDQSNSKQCVNNNNNNNNWNPFEECAVNNSSFDVKMINHEAKEHSELEDEENSLFINMTKWSPTFMFNNSSILQQHHQYAQFQCLEKPWEDYNNTI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00821 347 MobiDBLite consensus disorder prediction 172 200 - -
Car07g00821 347 ProSiteProfiles TCP domain profile. 111 169 IPR017887 -
Car07g00821 347 Pfam TCP family transcription factor 110 242 IPR017887 -
Car07g00821 347 ProSiteProfiles R domain profile. 224 241 IPR017888 -
Car07g00821 347 PANTHER TRANSCRIPTION FACTOR TCP18 28 300 - -
Car07g00821 347 MobiDBLite consensus disorder prediction 173 200 - -
Car07g00821 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 300 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00821 Car-Chr7 7305370 7306526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00821 47 170 TCP Transcription Factor Family AT3G18550 45.139 3.18e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car07g00821 TCP 2.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00821 - - gmx:100803669 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00337 03 8054731 8055474 Car07g00821 07 7305370 7306526 ECH
Car07g00821 07 7305370 7306526 Car07g00821 07 7305370 7306526 ECH