Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00818 ATGTCATCATCAAGTGGAACAACTTGGAGCTATGATGAAGAAAAAGCATTTGAGAATGCCATAGCCATGCATTGGATTCATGAAGATGAAGATTCAAAAGAGACACAATGGGAAAACATTGCTTCATGTGTCCCCAACAAAACCATGGAAGAAGTGAAACAACATTACCAAGTATTGGTAGATGATGTTAGTGCAATTGAGGCAGGACATGTTTCATTTCCAAATTATGCTAATGAAGAAACTTCATCTTCAAATAAAGATTCTTCTTCTTCTAAGGCTACCACCACAAGTTCAGATAAGAGATCAAGTTGCAATTTTGGAAGTGGATTTTCTGGTTTGGGACATGACTCCAAAGGAGGATTGTCAAGGTCATCATCTGAACAAGAAAGGAGAAAAGGAATTCCTTGGACTGAAGAAGAGCATAGgctatttttacttggtctagataagtttggaaaaggagattggaggagtatttcaaggaactttgtgatatctaggacaccaacacaagtggcaagtcatgcacaaaagtatttcataaggttgaattcaatgaatagagatagaaggaggtcaagtatacatgatattacTAGTGTAAACAATGGAGATGTAGCTAGTAATCATCATCATCATCAAGTACCAATAACAGGCCAACATAGTAGCACAATTGCTTCAAGCACAATGAGTTTAGGACAATCAATGAAGCATAGAGTTCAGCCTCATGGACATATGCCTGTTGGTGGTGGTTTAGGAATGTATGGAGCACCAGTTGGTCATCCTGTTGCTGCTCCTCCTCCTCATATGGCATCTGCAGTTGGAACTCCTGTTATGCTTCCTCATCCACCTTATGTTGTACCTCTTGCTTATCCAATGGCACCTCCTACAATGCATCAATAA 903 0.3245 MSSSSGTTWSYDEEKAFENAIAMHWIHEDEDSKETQWENIASCVPNKTMEEVKQHYQVLVDDVSAIEAGHVSFPNYANEETSSSNKDSSSSKATTTSSDKRSSCNFGSGFSGLGHDSKGGLSRSSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASNHHHHQVPITGQHSSTIASSTMSLGQSMKHRVQPHGHMPVGGGLGMYGAPVGHPVAAPPPHMASAVGTPVMLPHPPYVVPLAYPMAPPTMHQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00818 300 SMART sant 132 182 IPR001005 -
Car07g00818 300 SMART sant 5 62 IPR001005 -
Car07g00818 300 MobiDBLite consensus disorder prediction 75 110 - -
Car07g00818 300 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Car07g00818 300 SUPERFAMILY Homeodomain-like 130 185 IPR009057 -
Car07g00818 300 Gene3D - 1 73 - -
Car07g00818 300 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Car07g00818 300 Gene3D - 134 186 - -
Car07g00818 300 PANTHER TRANSCRIPTION FACTOR MYBS1 4 299 - -
Car07g00818 300 SUPERFAMILY Homeodomain-like 9 66 IPR009057 -
Car07g00818 300 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Car07g00818 300 Pfam Myb-like DNA-binding domain 8 59 IPR001005 -
Car07g00818 300 CDD SANT 135 180 IPR001005 -
Car07g00818 300 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Car07g00818 300 CDD SANT 8 60 IPR001005 -
Car07g00818 300 PANTHER TRANSCRIPTION FACTOR KUA1 4 299 - -
Car07g00818 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Car07g00818 300 MobiDBLite consensus disorder prediction 75 134 - -
Car07g00818 300 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 182 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00818 Car-Chr7 7270200 7271979 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car07g00818 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00818 - - gmx:778049 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00818 07 7270200 7271979 Car07g00818 07 7270200 7271979 ECH