Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00810 ATGTCTCAATTCAAATGTGAAGAAGCTGATAAAATGTTAGATGCTTTTATCTATGGTTATCTGATGAAGAAACAATTGTATGAAACTGCACGAACATTTCATGATGAAGGCAAGGTTGCACCGGATATTGCTACAGGTGCATCTACTGATTTTCTCTCTGATTGGTGGTCTGTCTTCTGGGACTTGTTTATGGCCAGAATAGGTCTGTCACACTCAGAAGCAGCAATATCTTACCTTAATTTCCAACAAATTAAGGCTCAAGAAATGCGGAAGCAAGGAGAGCAAGAGACAATCCAGGTTTTCTCACAGAGCCCTGCTCAGCAGCAGCAATGTTGGGGTGAAACTCAAATTGTTAATGGCAGTGTTCTCTGTCCCATAAACAACGATCCTTTGGTGAGGCAGAACTGGGTAACTTCGAATAGAATGGCATCAAAACTAAATGAGGCCAGACTGAAGCGTCCCCTCCAGGGAAATGCTTTACATGACACGACCATTAAGAAAATGAAAGCTAATAGCGCTGGTCAGATTCCGAGCAAAGATTACGTCTGGATGATGAACGAATTAGCAGCAATGACTGGTGGACAGGCTTCAGGACAAACATTGCTCCGCGCACCTAGCTTTTTACAAGAAAATCTTCAACAAGATCAAAATCAGAATCATCAACTTCCAGGCTCTACACAAGTCATGAACAGTGAAATGAATGCAATGATGAGATTTCCAGCAGTTGTTTCAGAAGGATCCTTTATCAGTGTTCACGGTTCAAATCAAGGCGGTAGCAATTTGACTATGAAAGGACGGCCTTTAGCAGGACTGGATCAGCTTAATCCAGAACTTCTCCAGTACTGTATTTTGATGCAGTCTTCACAATCTTTCAATCAATTTCTACCACGTCAGCAACATATGCTTCAGGCAGAACATAATTTAGTTAATCCATCTGTCACTGGTTTTGATAGCCAAAGACCAagggtgcttcttaataatcaagataatggtcccaggaaagatggccaatcaaattctgtaggtgATTCAATTCCTAATATTATAACACCTGCACAAATTGGTTTCCCTGAATTGCCTAATCTGGACTTGGATATGTTCCTTAAGGCTTCCAAAAGTCAAGTCGGGCAAAAGCTAAAGCGAAATAATGATTTGGACTCACTTGCATCAACACAGAATCAGTTGGCTGATATGGACCATCTTACGGGTGATGAATCTTTGGGAGACAACGTAGAGTCATTCTCATCTCTCGCTGATACAGACCATAAAGGGCGAGTTGACAAAGGATTCTCATTTAAGGAGGTAAAGCATGCAATGGCTAGTTCACATAAAGTTGACTGTTGTCACTTCTCCTTTGATGGAAAACTGCTTGTTACTGGTGGTCGTGATAAAACGGCTTCTCTGTGGTGCACAGAATCGTTTAACCTGAAATCTACTCTTGAAGAGCACACTCAACGGATAACTGATGTTAGATTTTGTCCAAGCATGTTGCGTGTTGCTACTTCCTCAGCCGACAAAACTGTAAAGGTTTGGGATGCTAATAATCCGAGGCATTCTCTTCAGACATTTACAGGGCATACAACAACTGTGATGTCACTAGACTTTCAGCCAAGTAAGGGCGATCTTATTTGCTCTTGTGATCATAAGGAGATAAGATGTTGGAGTATTAAAAATGGTAGTTGTGTTGGGGTTTTCAAGGGTGGTGTAACTCTGGTGAGATTTCAACCGGGTTTGGGAAAACTTCTTGCAGCAGCAGTAGATAATCAAATTCTCATTGTTGACGTAGAAAATCTGAGTTGCAGACTTAAATTGCAGGGCCACAAGAGCCGTGTTCGATCGGTGTGCTGGGACTCTTCTGGAAATTATCTTGCATCTGTTAGTGATGATCTAGTTAGAATCTGGGCTGTTGGATCTGATAGTGGCTGGGAATGTATTCACGAATTGAATACAGCTGGGTCTGAGAACAAATTAAAGACCTGTGCTTTCCATCCCATCTATCATCTTCTGGTCATTGGCTGCCATGAGACTCTTATGTTGTGGGACTTTATGGAGAGGAAAATAATGACTGTGCTCGCACATGACAAGCTTGTATCCGCGTTGGCCGTATCCGACGTTACCGGATTGATGGCTTCAGTTAGTCATGACAAGCATTTCAAGATCTGGAAGTGA 2169 0.4076 MSQFKCEEADKMLDAFIYGYLMKKQLYETARTFHDEGKVAPDIATGASTDFLSDWWSVFWDLFMARIGLSHSEAAISYLNFQQIKAQEMRKQGEQETIQVFSQSPAQQQQCWGETQIVNGSVLCPINNDPLVRQNWVTSNRMASKLNEARLKRPLQGNALHDTTIKKMKANSAGQIPSKDYVWMMNELAAMTGGQASGQTLLRAPSFLQENLQQDQNQNHQLPGSTQVMNSEMNAMMRFPAVVSEGSFISVHGSNQGGSNLTMKGRPLAGLDQLNPELLQYCILMQSSQSFNQFLPRQQHMLQAEHNLVNPSVTGFDSQRPRVLLNNQDNGPRKDGQSNSVGDSIPNIITPAQIGFPELPNLDLDMFLKASKSQVGQKLKRNNDLDSLASTQNQLADMDHLTGDESLGDNVESFSSLADTDHKGRVDKGFSFKEVKHAMASSHKVDCCHFSFDGKLLVTGGRDKTASLWCTESFNLKSTLEEHTQRITDVRFCPSMLRVATSSADKTVKVWDANNPRHSLQTFTGHTTTVMSLDFQPSKGDLICSCDHKEIRCWSIKNGSCVGVFKGGVTLVRFQPGLGKLLAAAVDNQILIVDVENLSCRLKLQGHKSRVRSVCWDSSGNYLASVSDDLVRIWAVGSDSGWECIHELNTAGSENKLKTCAFHPIYHLLVIGCHETLMLWDFMERKIMTVLAHDKLVSALAVSDVTGLMASVSHDKHFKIWK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 690 722 - -
Car07g00810 722 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 7 376 IPR044716 GO:0003714
Car07g00810 722 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 384 722 IPR044716 GO:0003714
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats profile. 480 521 IPR001680 GO:0005515
Car07g00810 722 CDD WD40 442 722 - -
Car07g00810 722 ProSitePatterns Trp-Asp (WD) repeats signature. 499 513 IPR019775 -
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats profile. 604 634 IPR001680 GO:0005515
Car07g00810 722 MobiDBLite consensus disorder prediction 312 346 - -
Car07g00810 722 Pfam LisH 11 36 IPR006594 GO:0005515
Car07g00810 722 Pfam WD domain, G-beta repeat 600 634 IPR001680 GO:0005515
Car07g00810 722 Pfam WD domain, G-beta repeat 442 469 IPR001680 GO:0005515
Car07g00810 722 Pfam WD domain, G-beta repeat 476 512 IPR001680 GO:0005515
Car07g00810 722 Pfam WD domain, G-beta repeat 519 554 IPR001680 GO:0005515
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats profile. 438 469 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 431 470 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 641 681 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 516 555 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 558 594 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 473 512 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 683 722 IPR001680 GO:0005515
Car07g00810 722 SMART WD40_4 597 635 IPR001680 GO:0005515
Car07g00810 722 Gene3D - 564 722 IPR015943 GO:0005515
Car07g00810 722 ProSiteProfiles LIS1 homology (LisH) motif profile. 9 41 IPR006594 GO:0005515
Car07g00810 722 PANTHER LISH-SSDP-WD40 7 376 - -
Car07g00810 722 PANTHER LISH-SSDP-WD40 384 722 - -
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 480 515 - -
Car07g00810 722 SUPERFAMILY WD40 repeat-like 431 722 IPR036322 GO:0005515
Car07g00810 722 Gene3D - 365 563 IPR015943 GO:0005515
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats profile. 523 564 IPR001680 GO:0005515
Car07g00810 722 ProSiteProfiles Trp-Asp (WD) repeats profile. 690 722 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00810 Car-Chr7 7169269 7180702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00810 439 682 Miscellaneous Gene Families AT5G08390 25.200 3.78e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Car07g00810 WD40 3.7e-06 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00810 - - cam:101501321 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00810 07 7169269 7180702 Car07g00810 07 7169269 7180702 ECH