Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00806 ATGGCATCACCATCTGAACTAGGCTTGGATTGCAAGCCACATAGCTATTCTATGTTACTGAAATCAGTTGGAGAACAGAGTGATCAAAGCTATAAGCTTGAAGAGTTTCTTTCTCGTTTAGAGGAAGAACGTCTCAAGATTGATGCTTTCAAGCGTGAACTTCCTCTCTGCATGCAACTTCTCACCAACGCCATGGAGGCATCAAAGCAACAACTTCAAGCCTTCAAAGTGAATCAAGGAACAAGACCAATTCTGGAAGAATTCATACCAGTAAAACAAGTAACCTCAGAAACCTCAGAAAAGACAACAAATAATAATAATGTATCTGATAAAGCAAATTGGATGACAAGTGCACAACTATGGAGCCAAACAAGTGAATTAGGAACAAAACAACAACAATCCTCAAATGATGAAACAGATATTAATATTGGTTTCAACATTAATAGTCCAAAAGCAGTTATAGAAAACAACAACAAACATAGAAACGGTGGAGGCTTTCTACCATTCTCAAAAGAAAGAAACAGCTCATGCAGTCAAGGACATAATACTCTCCCTGAACTAGCACTTGCCTCTAACCAAAAGGAAGTGGTTGAAGATAAAAAACATGTTGCAGAGGGAGAGAAAGGTGAGAAGAGGGAAAATAACAATATTTCAGGGAATGAAGTTGTTGATCATAAAGGGAGTCCAGTAGCAtcatctcatactcatactcaaacaacaacaaacaccaatactcataGGAAAGCAAGAAGGTGCTGGTCACCTGACTTGCACCGTAGATTTGTTAATGCTCTTCAAATGCTTGGTGGATCTCAAGTGGCAACACCAAAACAGATAAGGGAATTGATGAAGGTAGATGGTTTGACCAATGACGAAGTGAAAAGCCATCTGCAGAAATATAGGTTACACACAAGAAGGCCAAGCCCAAGTGCACAAACGGGTGCACCAGCAGCACAACTAGTAGTTTTAGGAGGAATATGGGTCCCACCAGAATACGCAACCGCAGCAGGACACACAGGAACACCAACTCTCTACGGTGCGCATCCTACATCTCATCATGTTACGCTTCCCCACTACTGCACCGCTCCTGGACAAGACTACTACACTACTGCACCACCACCGCCTCATCAGCAGCTACTTCCGCCGCCTCACCATATGCACCACCATCTCTACAAGACTACGCCGCACGCCCAGGGTTCGCCGGAAACACCTGGGGATGAGTTGGAGAGTATTGAGAATGGGAAGTCGGAGAGTAGTAGCTGGAAAGGAGGAGAGAGTTGTGAGAATGATGGAGACAGGAAAGCCTTGGCGGATGAGAGTAATGGGAGCGACGTTACTCTCAAATTTTAA 1350 0.4222 MASPSELGLDCKPHSYSMLLKSVGEQSDQSYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASKQQLQAFKVNQGTRPILEEFIPVKQVTSETSEKTTNNNNVSDKANWMTSAQLWSQTSELGTKQQQSSNDETDINIGFNINSPKAVIENNNKHRNGGGFLPFSKERNSSCSQGHNTLPELALASNQKEVVEDKKHVAEGEKGEKRENNNISGNEVVDHKGSPVASSHTHTQTTTNTNTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSAQTGAPAAQLVVLGGIWVPPEYATAAGHTGTPTLYGAHPTSHHVTLPHYCTAPGQDYYTTAPPPPHQQLLPPPHHMHHHLYKTTPHAQGSPETPGDELESIENGKSESSSWKGGESCENDGDRKALADESNGSDVTLKF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00806 449 Coils Coil 33 53 - -
Car07g00806 449 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 449 IPR044787 GO:0003700|GO:0006355
Car07g00806 449 MobiDBLite consensus disorder prediction 200 252 - -
Car07g00806 449 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Car07g00806 449 MobiDBLite consensus disorder prediction 367 449 - -
Car07g00806 449 MobiDBLite consensus disorder prediction 230 248 - -
Car07g00806 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 305 IPR017930 -
Car07g00806 449 MobiDBLite consensus disorder prediction 200 219 - -
Car07g00806 449 Pfam Myb-like DNA-binding domain 250 301 IPR001005 -
Car07g00806 449 Gene3D - 247 305 - -
Car07g00806 449 SUPERFAMILY Homeodomain-like 245 306 IPR009057 -
Car07g00806 449 Coils Coil 58 78 - -
Car07g00806 449 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00806 Car-Chr7 7124969 7127908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00806 1 449 G2-like Transcription Factor Family AT2G03500 49.791 6.21e-120 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car07g00806 Myb_DNA-binding 9.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00806 - - gmx:100807925 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00806 07 7124969 7127908 Car07g00806 07 7124969 7127908 ECH