Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00805 ATGACGTTGGACGACGATAGCTCTATATACGTTGGTGGTCTGCCCTACGACGCCTCCGAAGATACCATTCGCACTGTCTTCAACTTGTATGGTGCCATCCTTGATGTCAAGATTATCAATGACCAGCGTACCAGAGGCAAATGCTATTGTTTTGTTACTTTCACAAACCCTAGGTCAGCAATTGATGCTATCAACGATATGAATGGCAGAAGCATAGGTGGGCGTATGGTTAAAGTTAATGGGGTGAAGACTCGTGGTGGCAGATCAAATTTTGGGAGAGAACGAAATTTTTATCATAATAATGATGAGAGGAATGGAGACTGGGATCGTGGTAGAGATCGAGACCAAGATTATGATCATGGTAATGAGAAAGATGCATATCATGGTAGAGATCGAGACCTAAATTATGATCATGGTAATGAGAAAGATGGATATCGTGGTAGAGATCGAGACCAAGTTTATGATCATAATAATGAGAAAGATGGATATCGTGGTAGAGATCGAGACCAAGTTTATGATCATGGTAATGAGAAAGATGGATATCGTGGTAGAGATCGAGACCAAGATTATGATCATTGTAATGAGAAAGATGGATACCGTGGTAGAGATCGAGACCAAGATTATGATCATGGTAACGAGAAAGATGGATATCGTGGTAGAGATCGAGACCAAGATTATGATCATGGTAACGAGAAAGATGGATTTAGGAATAGAAACAgtgattggactcgacatcgtgatcggtctcgagatcgtgatTGGTCCCGAGACCATGAAAAGGATAGGGATAGAAGAGTTGAACATGTGCAAGATTATGATCAAGCGAAAGAAAGCATGTTAGATGATGATTGGAATAGAGAGGATGATAGGGCTGAAAATGAACAAGAAAACAGCAGGGTACATGGTGGAGATGTGGATAGAGACCATAACACAGATTTGGAGGCAGACAGAAAGATGGATAGGGTTAGTGATCCTGATGGAAGTTTTGACGAACATAAAAAGGAACAGCCAAGGAGAAACATCGATTTGAATGTGACAAATCAAAATAGTCCATCAGATTCTAATGGTGGCCGCAATGATGAGGTTGAAGATGAATTAGATAGGTCAATGCAACGGCTTGATCAACTAAAAAAGGAGGTTTCTCATTTGGAAGGGGGATTGGAAGAGAAAAGGCACAATGTTATGGAGTTACAAAAACAATCAAAGAAGTTGGAGGAAGCAGTAATTACTGCTAAGAAACAGTCTATATCTCGCCAGATGCAGTTGAGTAAGCTGCATAAGTGTTTTCTCCAAATGCAACAttgcacagaaagacttaaagctagtgaaaatgaACTCCGGGCTCTAGTTGATACAGTAATGTTTGAGAGTGATGGGGATGGTGCTGTACAACATACAAATGGAAGTCTTGATGGCAGATAG 1422 0.3847 MTLDDDSSIYVGGLPYDASEDTIRTVFNLYGAILDVKIINDQRTRGKCYCFVTFTNPRSAIDAINDMNGRSIGGRMVKVNGVKTRGGRSNFGRERNFYHNNDERNGDWDRGRDRDQDYDHGNEKDAYHGRDRDLNYDHGNEKDGYRGRDRDQVYDHNNEKDGYRGRDRDQVYDHGNEKDGYRGRDRDQDYDHCNEKDGYRGRDRDQDYDHGNEKDGYRGRDRDQDYDHGNEKDGFRNRNSDWTRHRDRSRDRDWSRDHEKDRDRRVEHVQDYDQAKESMLDDDWNREDDRAENEQENSRVHGGDVDRDHNTDLEADRKMDRVSDPDGSFDEHKKEQPRRNIDLNVTNQNSPSDSNGGRNDEVEDELDRSMQRLDQLKKEVSHLEGGLEEKRHNVMELQKQSKKLEEAVITAKKQSISRQMQLSKLHKCFLQMQHCTERLKASENELRALVDTVMFESDGDGAVQHTNGSLDGR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00805 473 MobiDBLite consensus disorder prediction 88 340 - -
Car07g00805 473 MobiDBLite consensus disorder prediction 83 364 - -
Car07g00805 473 CDD RRM_SF 9 80 - -
Car07g00805 473 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 84 IPR000504 GO:0003723
Car07g00805 473 Coils Coil 359 414 - -
Car07g00805 473 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 204 469 - -
Car07g00805 473 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 216 - -
Car07g00805 473 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 77 IPR000504 GO:0003723
Car07g00805 473 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 216 - -
Car07g00805 473 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 204 469 - -
Car07g00805 473 MobiDBLite consensus disorder prediction 341 356 - -
Car07g00805 473 SMART rrm1_1 8 80 IPR000504 GO:0003723
Car07g00805 473 Coils Coil 432 452 - -
Car07g00805 473 SUPERFAMILY RNA-binding domain, RBD 4 113 IPR035979 GO:0003676
Car07g00805 473 Gene3D - 2 98 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00805 7 73 Eukaryotic Initiation Factors Gene Family AT1G22760 34.328 2.48e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00805 - - cam:101499305 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00805 07 7120745 7124088 Car07g00805 07 7120745 7124088 ECH