Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00804 ATGATGGCTATGAAGAAATCCTCAGAGCTTAGAAGAAGAAGTGAAAGCAAAAAAGAGAAAATTCAAGAAAATGGACTTGAATCTCAACTTGGTTCATGTTCATTAGCCTCAGGCAAAAGTCTTGTTTTTTCTGCTAGGCCTGGCTATGGCCAACTGGGGAAGAAGTGTGTTGTCAAAGCTAATCACTTCCTTGCAGATATATCAGTATCTGACTTGAGCCATTACAATGTTGATATAACACCTGAAGTTAATTCTCGAAAAACAAGAAAAGCTATCATAGCTGAGTTAGTGAGGCTTCACCAAAACACTGAGTTGGGAAAGAAGCTCCCTGTTTATGATGGTGCAAAGAGCCTTTACACTGCTGGTTTGCTTCCTTTTGAACACAAAGCGTTCAATATAGTATTGAGTGAGGATGATGAGGGTACTTGTAGTACAAGGAAAAGAGAATTTGAAGTTGTAATCAAGTTTGCAGCTCATGTTAGCATGCATCAGTTACATGAGCTTCTCAGTGGAAAACAAGTGAATACTCCACATGAAGCTCTTAATGTCATTGACATTGTGTTGAAGGAGCTTGCATCTCAAAGCTATGTATCAATTGGGAGATTTATCTTTTCTCCGGATTTAAGAAAACCATCACAGCTGAGTGGCGGTTTGGAATTATGGCGCGGTTTCTACCAGAGTATAAGGCCTACTCAGATGGGACTATCACTTAATGTTGATATGTCCTCATCGGCATTTATAGAACCGCTCCCTGTGATCGACTTTGTAACTCAAATTTTGGGAAAAGATGTGAGATCAAGGCCATTGTCAGATGCAGATCGTGTCAAGATTAAGAAAGCTTTAAGAGGTGTGAAAGTAGAAGTTACACATAGAGGAAGTTTTAAGAGGAAGTACAGGATAACAGGATTGACATCACAGCCTACAAGAGAGCTCGTTTTTCCTCTGGATGAGAAAATGAACATGAAATCAGTAATTGATTACTTTCTAGAAATGTATGGATACACAATCATGTATCCTCATTTACCTTGCCTTCAAGTTGGAAGCCAAAAGAAGGTGAACTATTTGCCCATGGAGGCATGCAAGATAGTTAAGGGTCAGAGATATACAAAAGGGCTTAATGAGAAGCAGATAACTTCTCTGCTAAAGATCTCATGCCAAAGGCCACGTGAAAAAGAGAATGATATCCTACAGACAATGCATAAACATGATTATAAAGATAATCCTTATGCAAAGGAGTTTGGTATCAGCATAGACAGCAAGCTTGCATCAGTCGAGGCTCGGGTTCTTCCTGCTCCATGGTTGAAATACAATGACACTGGAAGAGATAAAAAATACTTACCAAGAGTTGGTCAATGGAACATGATGAACAAGAAAGTTATAAATGGAAGCAAAGTAAGTTATTGGGCATGTATCAATTTCTCACGAAGTGTCCAAGAACATACAGCTCGTTCATTTTGCCAACAATTAGTTCAGAGTTGCCAAATTTCAGGCATGGAATTTAGTCAGGAACCTGTGATTCCTATATATTCAGCAAGACCAGATTTGGTAAAGAAGGCCTTGAAGTATGTACATTCTTCTGCTCTAAAAAAACTCGGCGGGAAAGAGCTAGAGTTACTCATTGCCATTCTTCCAGACAACAATGGCTCTCTCTATGGTGATCTCAAAAAAATCTGTGAAACAGATCTCGGGCTGATTTCCCAGTGTTGTCTTACAAAATACGTCTTCAAGATTAATAGACAATATTTGTCAAATGTAGCGCTAAAGATCAATGTCAAGATGGGAGGAAGGAACACAGTACTGTTGGATGCTCTAAGTTGGAGGATCCCGTTGGTTAGTGACGTTCCAACAATAATTTTTGGAGCTGATGTAACTCATCCCGATCCTTGCGAGCACACTTGTCCATCCATTGCTGCTGTTGTAGCATCCCAGGACTGGCCAGAAGTGACAAAGTATGCAGGATTGGTATGCGCTCAGCCTCATCGCGAGGAACTTATTCAAGATCTTTTCAAATGTTGGAATGATCCTCATTGCGGCATCATTAATGGTGGAATGATCAGAGAGCTCTTACTCTCATTTCAGAAGGCAACTGGAAAAAAACCACTTAGAATAATATTTTACAGGGATGGAGTAAGTGAAGGACAGTTCTACCAGGTTTTGCTACATGAGCTTGATGCCATCCGGAAGGCTTGTGCATCTTTGGAACCTAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGGCATCACACTAGACTCTTCTCAAACAATCACGACGACAGAAGCAGCACTGATAAGAGTGGGAATATCTTACCAGGTACTGTGGTGGATTCAAAGATTTGTCATCCTACTGAGTTTGACTTCTACTTGTGCAGTCATGCAGGAGTTCAGGGTACAAGTAGACCAGTTCATTACAATGTTCTATGGGACGAAAACAACTTTAGTGCTGATGAGATTCAGTCCTTAACTAATAACTTGTGCTACACCTATGCAAGATGTACGCGATCTGTTTCTGTGGTGCCTCCTGTGTACTATGCTCACCTGGCAGCTTACAGAGCTCGATTCTACATGGAACCCAATGTCCATGAAACTGCAAAATCGCAAACTACAAGATCAAAAAATGAGTCGGTTCGGCCACTACCAGCTCTAAAAGAGAAGATTAAGAATGTAATGTTTTATTGTTGA 2688 0.4036 MMAMKKSSELRRRSESKKEKIQENGLESQLGSCSLASGKSLVFSARPGYGQLGKKCVVKANHFLADISVSDLSHYNVDITPEVNSRKTRKAIIAELVRLHQNTELGKKLPVYDGAKSLYTAGLLPFEHKAFNIVLSEDDEGTCSTRKREFEVVIKFAAHVSMHQLHELLSGKQVNTPHEALNVIDIVLKELASQSYVSIGRFIFSPDLRKPSQLSGGLELWRGFYQSIRPTQMGLSLNVDMSSSAFIEPLPVIDFVTQILGKDVRSRPLSDADRVKIKKALRGVKVEVTHRGSFKRKYRITGLTSQPTRELVFPLDEKMNMKSVIDYFLEMYGYTIMYPHLPCLQVGSQKKVNYLPMEACKIVKGQRYTKGLNEKQITSLLKISCQRPREKENDILQTMHKHDYKDNPYAKEFGISIDSKLASVEARVLPAPWLKYNDTGRDKKYLPRVGQWNMMNKKVINGSKVSYWACINFSRSVQEHTARSFCQQLVQSCQISGMEFSQEPVIPIYSARPDLVKKALKYVHSSALKKLGGKELELLIAILPDNNGSLYGDLKKICETDLGLISQCCLTKYVFKINRQYLSNVALKINVKMGGRNTVLLDALSWRIPLVSDVPTIIFGADVTHPDPCEHTCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWNDPHCGIINGGMIRELLLSFQKATGKKPLRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGVQGTSRPVHYNVLWDENNFSADEIQSLTNNLCYTYARCTRSVSVVPPVYYAHLAAYRARFYMEPNVHETAKSQTTRSKNESVRPLPALKEKIKNVMFYC 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00804 895 Gene3D - 428 601 - -
Car07g00804 895 SUPERFAMILY PAZ domain 244 404 IPR036085 GO:0005515
Car07g00804 895 SMART DUF1785_2 197 249 IPR014811 -
Car07g00804 895 Pfam Piwi domain 539 858 IPR003165 GO:0003676
Car07g00804 895 Pfam Argonaute linker 1 domain 198 247 IPR014811 -
Car07g00804 895 Pfam Argonaute linker 2 domain 390 436 IPR032472 -
Car07g00804 895 ProSiteProfiles PAZ domain profile. 250 364 IPR003100 GO:0005515
Car07g00804 895 SUPERFAMILY Ribonuclease H-like 526 859 IPR012337 -
Car07g00804 895 SMART Piwi_a_2 538 859 IPR003165 GO:0003676
Car07g00804 895 Coils Coil 4 24 - -
Car07g00804 895 MobiDBLite consensus disorder prediction 1 23 - -
Car07g00804 895 Pfam PAZ domain 253 380 IPR003100 GO:0005515
Car07g00804 895 PANTHER PROTEIN ARGONAUTE 10 8 894 - -
Car07g00804 895 Pfam Mid domain of argonaute 447 524 IPR032473 -
Car07g00804 895 Gene3D - 607 895 IPR036397 GO:0003676
Car07g00804 895 Pfam N-terminal domain of argonaute 54 188 IPR032474 -
Car07g00804 895 CDD Piwi_ago-like 408 858 IPR045246 -
Car07g00804 895 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 8 894 - -
Car07g00804 895 SMART PAZ_2_a_3 254 386 IPR003100 GO:0005515
Car07g00804 895 CDD PAZ_argonaute_like 249 363 - -
Car07g00804 895 ProSiteProfiles Piwi domain profile. 538 859 IPR003165 GO:0003676
Car07g00804 895 Gene3D paz domain 244 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00804 Car-Chr7 7109482 7115679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00804 43 895 Eukaryotic Initiation Factors Gene Family AT5G43810 71.080 0.0 1331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00804 K11593 - gmx:100808457 1556.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00804 07 7109482 7115679 Car07g00804 07 7109482 7115679 ECH