Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00798 ATGATTGGAGAAGTTCAGCTTCAGCCTCCACCGATTCTGCAAAACCCTAGTGATTCTGATCCTTTACTCGATCATCAAGATGATGTTCAAGATGAATCATCCCCTGGAAGTTCTACTGAGATTAAGGATCAGGAAGATGTTGAGGCTGGTTTACTCCCTTGTTGTCGAATTTGCCTCGAAACCGATTCTGATTTTGAGGATGAATTGATATCTCCATGCATGTGCAAAGGAACCCAACAGTTTGTTCATCGTTCTTGTCTTGATCACTGGCGCTCAGTAAAGGAAGGATTTGCCTTTTCACATTGCTCCACCTGCAAAGCCCAATTTCATCTTCGAGTTGAAATGTTTGAGGACAACTCTTGGCGTCAAATAAAGTTCAGGCTTTTTGTGGCAAGGGATGTTTTCCTTGTTTTTCTGGCTGTACAAACTGTGATTGCTGCTATTGGTGGCTTTGCGTACATCATGGATAAAGATGGGAACTTCAGGAACTCATTTGATGATGGTTGGGATAGGATACTGTCAAAGCATCCTATACCATTTTATTATTGTATTGGAGTGGTGGCCTTCTTTGTACTTATTGGATTTTTTGGTCTCATACTGCATTGCTCCTCCCTCAATAGCAATGACCCCAGAATGGCTGGTTGTCAAAACTGTTGCTACGGATGGGGCATCTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCTCTTGTGGTTGTTTTTGTTGTCATCTTTGCAATTCTTGGTGTAGCTTATGGTTTTCTTGCATCAACCATGGCAATTCAAAGAATTTGGCAGAGGCATTACCATATCCTCACCAAGAGGGAGCTTACAAAGGAATACATAGTAGAGGATCTTCAGGGCTGTTATTTCCCACCAAAGTTAGACCCAGAACACGAAAGTCGCCTCAAAATGCTTAAGCTTTTGTGA 933 0.4234 MIGEVQLQPPPILQNPSDSDPLLDHQDDVQDESSPGSSTEIKDQEDVEAGLLPCCRICLETDSDFEDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCSTCKAQFHLRVEMFEDNSWRQIKFRLFVARDVFLVFLAVQTVIAAIGGFAYIMDKDGNFRNSFDDGWDRILSKHPIPFYYCIGVVAFFVLIGFFGLILHCSSLNSNDPRMAGCQNCCYGWGILDCFPASMEACFALVVVFVVIFAILGVAYGFLASTMAIQRIWQRHYHILTKRELTKEYIVEDLQGCYFPPKLDPEHESRLKMLKLL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00798 310 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 310 - -
Car07g00798 310 SUPERFAMILY RING/U-box 53 110 - -
Car07g00798 310 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 310 - -
Car07g00798 310 CDD RING_CH-C4HC3_MARCH 55 106 - -
Car07g00798 310 MobiDBLite consensus disorder prediction 1 43 - -
Car07g00798 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 120 IPR013083 -
Car07g00798 310 SMART ringv_2 54 106 IPR011016 GO:0008270
Car07g00798 310 ProSiteProfiles Zinc finger RING-CH-type profile. 47 112 IPR011016 GO:0008270
Car07g00798 310 Pfam RING-variant domain 55 105 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00798 Car-Chr7 7086878 7090228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00798 1 310 C3H Transcription Factor Family AT1G11020 79.439 7.23e-171 474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00798 07 7086878 7090228 Car07g00798 07 7086878 7090228 ECH