Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00797 ATGGTGTTGCCTATGGCTATGTGTGGACAAGAAGAACTTGAATTATCTCTAGATGGAAGTCACTATAGTCTTTCTACCGGAATATTACCTTCTCTCGGTGCAAAAAGTAACCGGAGAGTTAAACTCAGACCTCTCATTATATCCCCCTATGACCGCCGTTACAGGATATGGGAAACATTTCTTGTAATACTGGTGGTGTATACTGCTTGGGTATCTCCATTTGAATTTGGGTTCCTGAGGAAACCACAAGCACCACTTTCAATCACAGATAATATTGTGAATGGATTCTTTTTTATAGACATAGTTCTCACTTTCTTTGTGGCTTACGTAGACAAAACAACCTATTTATTCGTAGATAAGCCAAAACAGATTGCTTGGAAATATGCAAGAACTTGGCTTGCCTTTGATGTTATCTCCATCATTCCTTCAGAGCTTGTTGTAAAGCTATCTCCTTCTCCTTTCCAAACCTATGGTTTATTCGACATGCTTAGGCTTTGGCGTCTTCGAAGAGTTAGTGCTCTGTTTTCTCGGCTTGAGAAGGACAGAAACTATAACTATTTTTGGGTTCGGTGTGCAAAGCTTATTTGTGTTACCCTTTTTGCTGTACATTGTGCTGGATGTTTTTATTATCTAATTGCCGCACGTTATCATGATCCAAAAAGGACTTGGATTGGGCAAACATCGGAAGATTTTGTTCAACTGAGTTTGTGGACAAGATATGTAACAACTATTTACTGGTCCATCACTACTTTGACAACAGTTGGTTATGGAGATTTGCATCCTGTTAATGAAAGGGAAATGATGTTTGACATTTTTTACATGCTCTTCAATCTTGGATTAACAGCATATTTGATTGGTAATATGACTAACTTAGTTGTCCACGGCACAAGTCGAACTAGAAAATTTAGGGATACCATACAAGCTGCCTCAAGTTTTGCACAAAGGAACCAATTACCACCTCGTTTACAAGATCAAATGCTTGCACACTTGTGTTTGAAGTTTAGAACAGACTCAGAAGGATTGCAGCAACAAGAGACACTTGACTCTCTTCCTAAAGCTATTAGATCAAGCATTTCACATTATCTTTTCTATTCTCTTATGGATAATGTTTACTTATTTAAGGGGGTTTCAAATGATTTGCTCTTTCAATTGGTATCAGAGATGAAACCAGAGTATTTTCCCCCCAAAGAAGATGTTATTTTGCAAAATGAAGCTCCAACTGATTTTTACATTCTAGTCACGGGTGCCGTGGAGTTGTTAGTTCTCAAAGGTGGAGTTGAACAAGTTGTTGGAGTGGCAAAAACAGGAGAACTTTGTGGCGAGATTGGTGTTCTTTGCTATAAACCACAACATTTTACAGTTCGAACCAAACGATTAAGTCAATTGTTGAGGTTGAACCGTACCACCTTCTTGAATATTGTTCAGGCTAATGTTGGGGACGGTACCATAATCATGAATAATCTTCTTAAGCATTTGAAAGAGCTGAACGATCCAATAATGGAAGGAGTGTTGGTAGAGACAGAAAACATGTTAGCTCGTGGTAGGATGGACCTACCAGTAAGTCTATGCTTTGCAGCATCAAGAGGAGATGATTTGTTGTTACATCAATTGTTAAAACGGGGTCTGGATCCAAATGAATCTGACAACAATGGAAGGACAGCTTTGCATATAGCAGCATCTAAAGGAAAAGAAAACTGTGTTTTACTTCTTCTGGATTATGGGGCCAATCCCAACATTAAAGATTCAGATGGAAATGTAGCACTATGGGAAGCTATACTTGGTGGACATGAATTAGTGGGCAAACTTTTGATAGAAAATGGTGCTACCTTACAAAACGGTGATGTTGGTCAATACGCATGCACTGCTGCTGAACAAAACAATCTCAATTTGCTAAAAGACATTAGGCGTCACGGAGGAGACATCACACTCACAAACAGCCTCGGAACTACAGCATTACATGTTGCTGTCTCCGAAGACAACGTTGATATTGTCAAATATCTTTTAGATCAAGGTGCTAACATTGACAAACCAGACAAACATGGTTGGACTCCCAGAGATTTAGCTGATCAACAAGGACATATAGAAATCAAAGCCATTTTTGAAGCCAAAGGAGAACCTAAGGCTCAATCTTTTGTTGCTATGCCTATTCCTGAGAGACAGGGTAGTAACGTGAGGTACCTTGGTAGATTTACTAGCGAGCCAACAATTCCTACATTACAACAAGATGGAACATTTAATGGAAATGATGGATCTTGGATGGAAAATCGCCCGAGGCGAAGGACTAATAACTATCATAACTCGCTTTTTGGGATAATGTCGGCTGCACACAAAGGAGAAAATGATCATTTTTTTCCTGTTAATACTAACATGAATAATAGCAATGCAAGGCATGGTGGTGTGAATAGTATTCTGCGTCAAACTAGAGTTACAATTAGTTGTCCTGAAAAAGGTGAGCTTGCTGGGAAGCTTGTATTGTTGCCTGAGAGTTTTAAAGAGTTGCTTGAGATTGGAGCTAACAAATTTGGTATTGTTGTGGCTAAGGTTGTGTGCAAATATGGTGGAGCTGAAATTGATAATATAGATGTTATTAGAGATGGTGATCATCTTGTTTTTGTTGGTGCTGGTGGGGTGTTAGATTCCAATTGTCCAACACCTTCCAATGGTGTCATTCCATAG 2676 0.3905 MVLPMAMCGQEELELSLDGSHYSLSTGILPSLGAKSNRRVKLRPLIISPYDRRYRIWETFLVILVVYTAWVSPFEFGFLRKPQAPLSITDNIVNGFFFIDIVLTFFVAYVDKTTYLFVDKPKQIAWKYARTWLAFDVISIIPSELVVKLSPSPFQTYGLFDMLRLWRLRRVSALFSRLEKDRNYNYFWVRCAKLICVTLFAVHCAGCFYYLIAARYHDPKRTWIGQTSEDFVQLSLWTRYVTTIYWSITTLTTVGYGDLHPVNEREMMFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRDTIQAASSFAQRNQLPPRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSLMDNVYLFKGVSNDLLFQLVSEMKPEYFPPKEDVILQNEAPTDFYILVTGAVELLVLKGGVEQVVGVAKTGELCGEIGVLCYKPQHFTVRTKRLSQLLRLNRTTFLNIVQANVGDGTIIMNNLLKHLKELNDPIMEGVLVETENMLARGRMDLPVSLCFAASRGDDLLLHQLLKRGLDPNESDNNGRTALHIAASKGKENCVLLLLDYGANPNIKDSDGNVALWEAILGGHELVGKLLIENGATLQNGDVGQYACTAAEQNNLNLLKDIRRHGGDITLTNSLGTTALHVAVSEDNVDIVKYLLDQGANIDKPDKHGWTPRDLADQQGHIEIKAIFEAKGEPKAQSFVAMPIPERQGSNVRYLGRFTSEPTIPTLQQDGTFNGNDGSWMENRPRRRTNNYHNSLFGIMSAAHKGENDHFFPVNTNMNNSNARHGGVNSILRQTRVTISCPEKGELAGKLVLLPESFKELLEIGANKFGIVVAKVVCKYGGAEIDNIDVIRDGDHLVFVGAGGVLDSNCPTPSNGVIP 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00797 891 SMART ANK_2a 550 579 IPR002110 GO:0005515
Car07g00797 891 SMART ANK_2a 647 676 IPR002110 GO:0005515
Car07g00797 891 SMART ANK_2a 517 546 IPR002110 GO:0005515
Car07g00797 891 SMART ANK_2a 583 612 IPR002110 GO:0005515
Car07g00797 891 MobiDBLite consensus disorder prediction 737 756 - -
Car07g00797 891 MobiDBLite consensus disorder prediction 737 751 - -
Car07g00797 891 CDD CAP_ED 372 477 IPR000595 -
Car07g00797 891 ProSiteProfiles KHA domain profile. 808 889 IPR021789 -
Car07g00797 891 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Car07g00797 891 Pfam Ankyrin repeats (many copies) 637 688 IPR002110 GO:0005515
Car07g00797 891 Gene3D Jelly Rolls 336 496 IPR014710 -
Car07g00797 891 PRINTS Ankyrin repeat signature 551 566 IPR002110 GO:0005515
Car07g00797 891 PRINTS Ankyrin repeat signature 663 677 IPR002110 GO:0005515
Car07g00797 891 PANTHER K+ TRANSPORTER 1-RELATED 11 873 - -
Car07g00797 891 SUPERFAMILY cAMP-binding domain-like 297 492 IPR018490 -
Car07g00797 891 Pfam Cyclic nucleotide-binding domain 391 476 IPR000595 -
Car07g00797 891 PANTHER POTASSIUM CHANNEL AKT1 11 873 IPR045319 GO:0005249|GO:0006813
Car07g00797 891 Gene3D - 56 293 - -
Car07g00797 891 Pfam Ankyrin repeats (3 copies) 522 610 IPR002110 GO:0005515
Car07g00797 891 ProSiteProfiles Ankyrin repeat profile. 647 679 IPR002110 GO:0005515
Car07g00797 891 Gene3D - 518 701 IPR036770 -
Car07g00797 891 ProSiteProfiles cAMP/cGMP binding motif profile. 372 474 IPR000595 -
Car07g00797 891 SUPERFAMILY Voltage-gated potassium channels 49 293 - -
Car07g00797 891 PRINTS EAG/ELK/ERG potassium channel family signature 67 74 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g00797 891 PRINTS EAG/ELK/ERG potassium channel family signature 90 100 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g00797 891 PRINTS EAG/ELK/ERG potassium channel family signature 101 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g00797 891 PRINTS EAG/ELK/ERG potassium channel family signature 240 257 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g00797 891 PRINTS EAG/ELK/ERG potassium channel family signature 266 277 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g00797 891 PRINTS EAG/ELK/ERG potassium channel family signature 284 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car07g00797 891 ProSiteProfiles Ankyrin repeat region circular profile. 647 679 - -
Car07g00797 891 Pfam KHA, dimerisation domain of potassium ion channel 808 871 IPR021789 -
Car07g00797 891 ProSiteProfiles Ankyrin repeat region circular profile. 550 581 - -
Car07g00797 891 Pfam Ion transport protein 55 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car07g00797 891 SUPERFAMILY Ankyrin repeat 521 700 IPR036770 -
Car07g00797 891 SMART cnmp_10 372 489 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00797 Car-Chr7 7077768 7085972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00797 103 871 Ion Channels AT2G26650 68.005 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00797 K21867 - gmx:100819491 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00797 07 7077768 7085972 Car07g00797 07 7077768 7085972 ECH