Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00792 ATGGAAGACAGAAAAGTGAACACGATCGCTGCTATATCAGTGGTTGCTCTTGTAATCGTAATCATCATATGTCGTGTGTCATTAAAACTCTCAAAAGCTTTCTTCTTAATCTGTGGCGCTTCAATCGCCGTAATCCTCGCTGTGTTTTCATGCATACTCATAAGACAACGTTACAACAAAAGAAGAAGAAAATTAGAATCACAGATAAAATCAGAAGGAAGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCAGGGGTTCCAACAAAGTTTCGTTACAAGGAGCTAGAAGAAGCAACCGATGGCTTTCAAGCACTACTTGGTAAAGGGTCATCAGCTTCAGTTTTCAAAGGAATTCTAAACGATGGAACTTCAGTTGCTGTGAAAACAATTCATGGTGAAGAAAGAGGTGACAGAGAGTTTAGATCAGAAGTTGCAGCTATTGCTAGTGTTCAACATGTTAATCTTGTGAGACTTTTTGGTTATTGTAATTCTCCAACACCACCTAGGTACCTTGTTTATGAGTTTATTCCAAATGGGTCATTGGATTGTTGGATTTTTCCTTTGAAGGAAAATAGGACACCGAGGCGTCGATGTGGTTGTTTACCATGGAATTTAAGGTATAAAGTTGCTATTGATGTTGCAAAAGCATTGAGTTATCTTCATCATGATTGTAGATCTACTGTTTTACATCTTGATGTTAAGCCAGAGAATATACTATTAGATGAAAATTATAAAGCACTTGTTTCTGATTTTGGTCTTTCAAAGCTTGTTGGAAAAGATGAGAGTCATGTTTTGACAACAATAAGAGGAACTAGAGGGTATTTAGCACCTGAATGGTTATTAGAACGTGGAATTTCTGAGAAAACTGATATATATAGTTATGGAATGGTTCTGTTAGAGATGATCGGAGGGAGAAGGAATGTTTCTAAAGTGGAAGATGTTAGCGACAAGTCAAGGACAAAATGGGAATTTTTTCCTAAAATTGTGAGTGAGAAATTGAGAGAAGGGAAATTAATGGAAATTGTGGATAAAAGGGTAGTGGAATTTGGAGGTGTTGATGAGAGTGAAGTGAATAGATTGGTGTGTATTGCTTTGTGGTGTATACAAGAGAAACCAAGGTTGAGGCCTAGAATGGTTGAAGTTGTTGACATGCTTGAAGGACGTGTGAGGGTGGAAGAACCACCAGGTACTAGAATGATTCTTCTTGATTTGTTAGCTGTTGATGAAGATCCTGCTGATAATAATAATCTAGCAAGGTTGTTGACTTCTGTTTCTAGTCATGTTGATTGTACTACTTCTAATTACTCTTTAGGATCCACTATTTTATCTGGTAGATAG 1347 0.3705 MEDRKVNTIAAISVVALVIVIIICRVSLKLSKAFFLICGASIAVILAVFSCILIRQRYNKRRRKLESQIKSEGRELRIEYSFLRKVAGVPTKFRYKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKTIHGEERGDREFRSEVAAIASVQHVNLVRLFGYCNSPTPPRYLVYEFIPNGSLDCWIFPLKENRTPRRRCGCLPWNLRYKVAIDVAKALSYLHHDCRSTVLHLDVKPENILLDENYKALVSDFGLSKLVGKDESHVLTTIRGTRGYLAPEWLLERGISEKTDIYSYGMVLLEMIGGRRNVSKVEDVSDKSRTKWEFFPKIVSEKLREGKLMEIVDKRVVEFGGVDESEVNRLVCIALWCIQEKPRLRPRMVEVVDMLEGRVRVEEPPGTRMILLDLLAVDEDPADNNNLARLLTSVSSHVDCTTSNYSLGSTILSGR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00792 448 ProSiteProfiles Protein kinase domain profile. 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00792 448 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00792 448 Gene3D Transferase(Phosphotransferase) domain 1 179 397 - -
Car07g00792 448 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Car07g00792 448 PANTHER RECEPTOR-LIKE KINASE 1 448 - -
Car07g00792 448 SMART serkin_6 103 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00792 448 Coils Coil 55 75 - -
Car07g00792 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Car07g00792 448 Gene3D Phosphorylase Kinase; domain 1 65 178 - -
Car07g00792 448 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 448 - -
Car07g00792 448 SUPERFAMILY Protein kinase-like (PK-like) 85 389 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00792 Car-Chr7 6983673 6985266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00792 1 400 Receptor kinase-like Gene Family AT5G20050 67.164 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car07g00792 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00792 - - gmx:100779485 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00792 07 6983673 6985266 Car07g00792 07 6983673 6985266 ECH
Car07g00792 07 6983673 6985266 Car01g01545 01 31764516 31766085 PCT