Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00787 ATGGCCACCACCACACCTTACAAAGATGAAACTGACTACGACAGCAGCTCCTCCTCCATCACCGTACCAGAATCAACCCGAAGCTGGATGACTAACCTCAGCTTCGGAAGCCGTCCTCGTGGAAGCTCCGTGTCCGTTTCTTCACTACTAGCCAGCTCCCATGTTAAGCCTCATAAGGCAAACCAAGTTGCATGGGAGGCGATGAGTCGACTCCGAAAGGACAGAGGTCGTCTCGGACTCGACCACTTCCGCCTCCTCAGAAGACTTGGTAGCGGCGACATAGGGAATGTGTATCTTTGTCAAATAAGGAACCCTGTTGTGGGTTTGGCACAGTGTTTTTATGCTATGAAAGTTGTTGATAGAGAAGCACTTGCTATAAGGAACAAACTACAGAGAGCAGAGATGGAGAAGGAGATTTTGGGTATGCTTGATCATCCTTTTTTGCCAACTTTGTATACTGACTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGCCAGCCTGGGAACCGCTTTTCCATTTCATCCACTAAGTTTTATGCAGCTGAGACACTATTAGCAATAGAGTATCTACACATGATGGGAATAGTATACAGAGATTTGAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGTTATCAGATTTTGATCTTTCTCTCAAATGCGACGTCGTTCCGAAGCTCCTAAGAACCAAAACAAGATCAGAACGTAGCATCAAAACTACAACAAAGAGAACTTCTTCACCTAATTCCTGCATTTCTCCAATGCAACCTGTTCTGTCCTGTTTCCTATCATCAACCAACAAAAACAAAACAACAGTTATAACAGAAAATGTTAATCATCATCAATCTCAATTAGACCTTGATCattttgattttgattttgattttgattttgatCCTGAGCTTGTAGCCGAACCGATCGATGCACGGTCCAAATCGTTCGTCGGAACACACGAATATTTAGCGCCGGAGGTTATATTGGGACAAGGACATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTGTATGAAATGTTGTATGGAAGAACACCATTTAAAGGTGAAAACAATGAGAAAACATTGGTCAACATTTTGAAGCAACCGTTGACTTTTCCTAGAATTGGTGTGAGTAGTAGTTATGAGTTTGAAGAAATGGTGAAAGTTCAAGATCTTATAAGTAAATTGCTGGTGAAGAATCCTAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAAACATGAGTTTTTTAAGGGTGTAAATTGGGCTTTGATTAGATCAGTTAAACCTCCTGAAGTTCCTAATGATAAGAACAAGATTAGGAGGAATAATATGGTTTTGATGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAGCTTACTCATCATTTTGATTACTTTTAA 1473 0.3999 MATTTPYKDETDYDSSSSSITVPESTRSWMTNLSFGSRPRGSSVSVSSLLASSHVKPHKANQVAWEAMSRLRKDRGRLGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLAQCFYAMKVVDREALAIRNKLQRAEMEKEILGMLDHPFLPTLYTDFDASHYSCLVMEFCPGGDLYAARQRQPGNRFSISSTKFYAAETLLAIEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRTKTRSERSIKTTTKRTSSPNSCISPMQPVLSCFLSSTNKNKTTVITENVNHHQSQLDLDHFDFDFDFDFDPELVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSSYEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKKHEFFKGVNWALIRSVKPPEVPNDKNKIRRNNMVLMPKLSKKDRDQPFQLTHHFDYF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00787 490 Gene3D Transferase(Phosphotransferase) domain 1 325 456 - -
Car07g00787 490 SUPERFAMILY Protein kinase-like (PK-like) 63 456 IPR011009 -
Car07g00787 490 SMART serkin_6 83 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00787 490 MobiDBLite consensus disorder prediction 1 22 - -
Car07g00787 490 CDD STKc_phototropin_like 81 455 - -
Car07g00787 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Car07g00787 490 ProSiteProfiles Protein kinase domain profile. 83 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00787 490 Pfam Protein kinase domain 324 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00787 490 Pfam Protein kinase domain 84 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00787 490 Gene3D Phosphorylase Kinase; domain 1 81 167 - -
Car07g00787 490 Coils Coil 116 136 - -
Car07g00787 490 PANTHER PROTEIN KINASE PINOID 2 6 490 - -
Car07g00787 490 Gene3D Transferase(Phosphotransferase) domain 1 168 237 - -
Car07g00787 490 PANTHER FLIPPASE KINASE 1-RELATED 6 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00787 Car-Chr7 6946789 6948506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00787 7 490 AGC Kinase Gene Family AT2G26700 58.476 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car07g00787 Pkinase 8.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00787 K08286 - gmx:100777988 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00787 07 6946789 6948506 Car07g00787 07 6946789 6948506 ECH