Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00773 ATGGCTTGTGCGCAAACTGGTTCCGGTAAAACGGCAGCTTTCTGTTTCCCTATTATATCTGGAATAATGAAGTGTCGTTTGGCTAATGACTTGTCGTCTATGCCACGTGTATCCAGTGTTGCATATCCCAGTGCACTCATCTTGTCTCCAACTAGAGAGTTATCCTGCCAGATACACTCAGAAGCTAGCAAATTTGCCTATCAAACAGGAGTTAAGATTGCTGTTGCTTATGGTGGTGCTCCAATTGGTCAACAGTTAAGGATTTTGGAGAGAGGCGTTGATATTTTAGTTGCAACTCCTGGACGTTTGGTTGATATGATTGAGAGAGAAAGGGTTTCATTAAAGAAGATTCAATTTCTTGCTTTGGATGAGGCTGATAGAATGTTGGATATGGGATTTGAGCATCAAATTCGAAATATTGTGCAGCAGATGCATATGCCTCCTCCGGGCGCTAGACAGACATTGCTTTTCAGTGCTACTTTTCCCGATAATATACAGAAGCTAGCGTCTGATTTTTTATCAAACTATGTGTTTTTGGCTGTTGGAAGGGTTGGTTCAAGCACTGAACTGATTGTACAGAAAATTGAATCTGTACAGGACATGGAGAAACGAAACCGTCTTGTGGATCTTCTCCGACACAATGTAGTCAATGGGAAGCTTGCTTTAACTCTTGTATTTGTTGAAACAAAGAAAGGAGCTGATGCTTTAGAAAACTGGTTGTGCAGAAGCGGGTTTCCAGCTATTGCTATACATGGTGACAAGGTTCAAATGGAGCGGGAAAGAGCTTTAAGATCTTTTAAACGCGGTTATACACCAATAATGGTTGCAACTGATGTAGCTTCAAGAGGATTGGATATCCCTCACGTTGCTCATGTTATTAACTTTGATTTGCCTAGAGACGTAGATGACTATGTTCATAGAATTGGTAGAACAGGCCGTGCTGGCCAATCTGGTTTGGCAACTGCTTTCTTCAGCAACAAGAACATGCCTATGGCAAAGGCTCTTGTTAGCCTTTTGCAGGAAGCAAAACAAGAAGTTCCCTCATGGCTCCTCCAATGTTCCGAGAGTTCAGCACCCGGTGAACGCAACAGTGGACCTCAAAGGCCCTGGAGAAGTAACTACGGAGGTCGTGATTTCCGGAATGCAGCTGAACCTGTAGCAGATAATTACAACTACAACAGATACAACAGTACTTACAACAATTATGGCGATCGTGATTTCAATAATGTCCCTCAGCAAGTGGAAAATTACCACTACAACAGTACCTACAGCAATGGAGACCATTCTGCAACATCTTATATTGATACCTCTTTAGAAATTCAAAACTCTAACAATTACTCGTATGACACCACAAATAATACAGTTTTTGCGGGAAGTCATAATTACAGTGGTTCTGGTTTACTTGAAGGCAGTGATGGTAATGGGCCATGTGGTTATGAATCTGTTGTGCCCACTGGGTGGGACTAA 1467 0.4213 MACAQTGSGKTAAFCFPIISGIMKCRLANDLSSMPRVSSVAYPSALILSPTRELSCQIHSEASKFAYQTGVKIAVAYGGAPIGQQLRILERGVDILVATPGRLVDMIERERVSLKKIQFLALDEADRMLDMGFEHQIRNIVQQMHMPPPGARQTLLFSATFPDNIQKLASDFLSNYVFLAVGRVGSSTELIVQKIESVQDMEKRNRLVDLLRHNVVNGKLALTLVFVETKKGADALENWLCRSGFPAIAIHGDKVQMERERALRSFKRGYTPIMVATDVASRGLDIPHVAHVINFDLPRDVDDYVHRIGRTGRAGQSGLATAFFSNKNMPMAKALVSLLQEAKQEVPSWLLQCSESSAPGERNSGPQRPWRSNYGGRDFRNAAEPVADNYNYNRYNSTYNNYGDRDFNNVPQQVENYHYNSTYSNGDHSATSYIDTSLEIQNSNNYSYDTTNNTVFAGSHNYSGSGLLEGSDGNGPCGYESVVPTGWD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00773 488 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 394 - -
Car07g00773 488 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 179 IPR014001 -
Car07g00773 488 Pfam Helicase conserved C-terminal domain 203 315 IPR001650 -
Car07g00773 488 MobiDBLite consensus disorder prediction 355 370 - -
Car07g00773 488 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-LIKE ISOFORM X1 1 394 - -
Car07g00773 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 334 IPR027417 -
Car07g00773 488 CDD SF2_C_DEAD 191 324 - -
Car07g00773 488 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 214 354 IPR001650 -
Car07g00773 488 SMART ultradead3 2 194 IPR014001 -
Car07g00773 488 SMART helicmild6 234 315 IPR001650 -
Car07g00773 488 Gene3D - 181 357 IPR027417 -
Car07g00773 488 Pfam DEAD/DEAH box helicase 2 168 IPR011545 GO:0003676|GO:0005524
Car07g00773 488 Gene3D - 1 180 IPR027417 -
Car07g00773 488 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00773 Car-Chr7 6850470 6853526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00773 4 348 Eukaryotic Initiation Factors Gene Family AT1G72730 34.195 6.43e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00773 K11594 - gmx:100817549 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00773 07 6850470 6853526 Car07g00773 07 6850470 6853526 ECH