Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00759 ATGTACTTCTCCATTACAACCAACATGGTTCAATCAAAGAAGTTCAGAGGTGTCAGGCAGCGTCATTGGGGTTCTTGGGTTTCTGAAATTCGTCACCCTCTTTTGAAGAGAAGGGTGTGGCTAGGAACATTTGAAACTGCAGAGGAAGCAGCTAGAGCATATGATCAAGCTGCAATATTAATGAGTGGAAGAAATGCCAAAACCAATTTCCCAATAACACAAACTCCTCAAGGTGATTCAAACACCACTACTGAAAACAGACCTTCAACATCTAAGGATCTTGAAGAAATTCTTCATGCTAAGCTTAGAAAATGTGGCAAACTACCTTCCCCTTCCATGACTTGTTTGAGGCTTGACACTGAAAACTCTCACATTGGTGTGTGGCAAAAACGTGCTGGTAGGTGTAATTCTGATTCTAATTGGGTTATGACTGTTCAACTTGGAAAAAATAAGACTGTAATTGAAGATAATGGTAGTACTAGTGGTAGTATTGTTGTTCCGACGACGACAACAACGACAACAGAAGAGGAAATTGTAAGAGGAGAGATTGATGAAGAAGATAGAATTGCTCTTCAAATGATAGAAGAACTTCTCAATGACAGGAACTGTGATCCAACTCCTTCATCACTTAATAATAGTACTAAACAAGGGGATGATATTAATACCTTTTTTTTTTGA 678 0.3864 MYFSITTNMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPQGDSNTTTENRPSTSKDLEEILHAKLRKCGKLPSPSMTCLRLDTENSHIGVWQKRAGRCNSDSNWVMTVQLGKNKTVIEDNGSTSGSIVVPTTTTTTTEEEIVRGEIDEEDRIALQMIEELLNDRNCDPTPSSLNNSTKQGDDINTFFF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00759 225 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Car07g00759 225 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Car07g00759 225 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Car07g00759 225 MobiDBLite consensus disorder prediction 69 88 - -
Car07g00759 225 CDD AP2 13 73 IPR001471 GO:0003700|GO:0006355
Car07g00759 225 MobiDBLite consensus disorder prediction 202 225 - -
Car07g00759 225 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Car07g00759 225 MobiDBLite consensus disorder prediction 69 92 - -
Car07g00759 225 Pfam AP2 domain 14 62 IPR001471 GO:0003700|GO:0006355
Car07g00759 225 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 9 207 - -
Car07g00759 225 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Car07g00759 225 Gene3D AP2/ERF domain 13 73 IPR036955 GO:0003700|GO:0006355
Car07g00759 225 MobiDBLite consensus disorder prediction 201 225 - -
Car07g00759 225 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 9 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00759 Car-Chr7 6754677 6755699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00759 9 199 AP2-EREBP Transcription Factor Family AT1G15360 61.386 2.01e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car07g00759 AP2 9.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00759 - - gsj:114375848 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00759 07 6754677 6755699 Car05g02960 05 74546722 74547773 ECH
Car07g00759 07 6754677 6755699 Car07g00759 07 6754677 6755699 ECH