Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00746 ATGTCTACCTGCAGCATCGATGTTGCAACTGAACAACTTTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCCTATTTGACATTGTGACCGTTCGATGTGGTCACTGCAGCAATCTATGGTCTGTTAACATGGCCGCCGCGTTTCAGTCACTTTCATGGCAAGAGCATCATCATCTTCAGGCACCTAGTCACTGCATGAATCCAGAGTATAGGATTCGCAGCGGATCCACTTCCAAATGCAACGATAGAATTGCAATGCGTACTGCACCAACCACTCATCTTACTGAGGAAAGGGTTGTTAACCGTCCTCCGGAGAAGAGGCAGCGTGTACCTTCTGCTTATAATCAATTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAATAATCCTGATATTAGTCACAGAGAAGCTTTCAGTACAGCTGCAAAGAATTGGGCACATTTTCCTCATATTCATTTTGGGCTGATGTTGGAGACCAACAATCAGGCTAAGATGGAGAATGTCTCTGAGAAGCGTTTGATGTCAAGGGCTGCGCTAATGAACAAATGA 576 0.4462 MSTCSIDVATEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAAFQSLSWQEHHHLQAPSHCMNPEYRIRSGSTSKCNDRIAMRTAPTTHLTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKMENVSEKRLMSRAALMNK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00746 191 Pfam YABBY protein 9 164 IPR006780 GO:0007275
Car07g00746 191 PANTHER PROTEIN YABBY 6-RELATED 1 181 IPR006780 GO:0007275
Car07g00746 191 Gene3D High mobility group box domain 104 182 IPR036910 -
Car07g00746 191 PANTHER AXIAL REGULATOR YABBY 5 1 181 - -
Car07g00746 191 SUPERFAMILY HMG-box 108 157 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00746 Car-Chr7 6633581 6636669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00746 8 174 C2C2-YABBY Transcription Factor Family AT2G26580 76.048 1.35e-88 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Car07g00746 YABBY 2.4e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00746 K25796 - gmx:100804731 345.51