Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00715 ATGGTTGTTGTTACTGCTCTATTCTTTGTACTATTGTTGCAATTGTCAACAATTTTTGGGTCTGAAATTGTCTTACAGACAAAGGATTGTGGCAATAATTGGGTAGCAAGTTCATATTCTAATAATCATGGTGAGGAACTGTTTTACATAAATGGGAATGTGGTAAACAAAGTTGATTTCTGTAAAGCTATCCAATTGTATATTGCAAAGGGTTGTGATTTGAAGGACTACTTTGGAAGCAACAACTGTGTATTGGATTTGGATGTCTCTTTTGTGGATTTTCCTTCAAAGGGAGGAAGGAAACTCTTGCAGAAAGATTTAAACAAGAATTCCACATCACAAGGAGTTTCTGAGACTGTGTCAAGCAACCAAGTTGGAATTTTTGCAGGTGGTGCTTTGTTGGTATGTTGTGCTGTTGTTTGTCCTTGTTTCTATGGCAAGAGAAGGAAGGCAACTGCTCATACTGTTCTGACCAAGGACCCAAATTCAATAGATTTAGCTACCTCCTTTGAACCATCTGTTTCTGATAAGATCCCGGCTAGTCCACTTCGAGTGCCGGCTAGTCCACTTCGGGTGCCGGCTAGTCCATCAAGATTCTCAATGTCTCCAAAACTCAGCAGCCTTCAGCCATTACATCTCAACCTGAGCCAGGTTTCTAAAGCTACACGTAACTTTTCAGAAGCATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAGGGCTAATTTAGACAATGGCTTGGTCGTGGCTGTAAAACGCGCAAAAAGGGAACATTTTGAGAGTTTGAGAACAGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATCGATCATCGAAACCTGGTGAAGCTACTTGGTTATATTGACAAAGGAAATGAACGTATCCTTATTACAGAGTATGTGCCAAACGGTACTCTTCGAGAACATTTGGATGGTTTGCGTGGAAAAATTGTCGATTTCAATCAGCGCCTGGAAATTGCAATTGATGTTGCTCATGGATTGACCTATCTGCATCTGTATGCAGAAAAGCAAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACTGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAAGCTTGGCCATGCAAACACTGACCAGACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGAGTATATGAAAACAAACCATCTCACACCCAAAAGTGATGTTTACTCATTTGGCATTTTGCTTTTAGAAATTCTGTCAGGCCGTCGTCCTGTGGAGTTGAAAAAAAGTGCTGAAGAGCGGGTTACTTTAAGATGGGCTTTCAGGAGATATAACGAAGGAAGTGTGGTGGAACTGCTTGATCCTTTAATGCAAGAAGCTGTGAATACAGAGGTTGTTGTCAAGATGTTTGACTTGGCATTTAACTGTGCAGCACCGGTAAGATCCGATCGACCTGACATGAAAACAGTGGGGGAGCAATTGTGGGCAATAAGAGCAGATTACCTCAAGAGCACTGCAAGGAGGGAATGA 1539 0.4126 MVVVTALFFVLLLQLSTIFGSEIVLQTKDCGNNWVASSYSNNHGEELFYINGNVVNKVDFCKAIQLYIAKGCDLKDYFGSNNCVLDLDVSFVDFPSKGGRKLLQKDLNKNSTSQGVSETVSSNQVGIFAGGALLVCCAVVCPCFYGKRRKATAHTVLTKDPNSIDLATSFEPSVSDKIPASPLRVPASPLRVPASPSRFSMSPKLSSLQPLHLNLSQVSKATRNFSEALQIGEGGFGTVYRANLDNGLVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERILITEYVPNGTLREHLDGLRGKIVDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGHANTDQTHISTKVKGTVGYLDPEYMKTNHLTPKSDVYSFGILLLEILSGRRPVELKKSAEERVTLRWAFRRYNEGSVVELLDPLMQEAVNTEVVVKMFDLAFNCAAPVRSDRPDMKTVGEQLWAIRADYLKSTARRE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00715 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Car07g00715 512 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Car07g00715 512 SUPERFAMILY Protein kinase-like (PK-like) 204 500 IPR011009 -
Car07g00715 512 CDD STKc_IRAK 231 497 - -
Car07g00715 512 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 120 505 - -
Car07g00715 512 PANTHER OS07G0166700 PROTEIN 120 505 IPR045272 GO:0004714|GO:0006468
Car07g00715 512 SMART serkin_6 225 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00715 512 ProSiteProfiles Protein kinase domain profile. 225 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00715 512 Gene3D Transferase(Phosphotransferase) domain 1 302 511 - -
Car07g00715 512 Pfam Protein tyrosine and serine/threonine kinase 230 497 IPR001245 GO:0004672|GO:0006468
Car07g00715 512 Gene3D Phosphorylase Kinase; domain 1 195 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00715 Car-Chr7 6234305 6238527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00715 79 501 Receptor kinase-like Gene Family AT3G46290 37.615 4.96e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Car07g00715 PK_Tyr_Ser-Thr 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00715 - - aprc:113845864 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00715 07 6234305 6238527 Car07g00715 07 6234305 6238527 ECH