Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00714 ATGTCCAATAACCACCTTTCTAATGGCGACTTCGAAACCCATCTTCGCCATCCCTTGTTATCATCTCAAAGATCCATTATCAACTCCACTTCTCAAGTTGCCATCGTTGGTGCCAATGTCTGCCCTATTGAAAGCCTCGATTACGAgatttttgagaatgagttttttaagcaggattggaggagtagaggggttgttcagatatttcagtacatttgcatgaaatggttattgtgttttatgattggtatgattgttggattagttgggttttgtaacaatcttgctgttgagaatcttgctggtatcaaGTTTGTCATCACATCTAATATGATGTTGGAGAGGAGGTTTCTGTTGGCATTTGTTATATTTTTTGCTTCAAATTTGAGTCTCACGCTTTTTGCATCTATAATAACGGCTTTTATAGCACCTACTGCTGCCGGTTCAGGTATATCAGAAGTGAAGGCTTACCTAAATGGTGTTGATGCACCTGGAATATTTACTGTACGAACTCTCTTCATTAAGATTATTGGAAGCATTACAGCAGTGTCATCATCTCTTGTCGTTGGGAAGGCAGGGCCTATGGTGCATACAGGTGCATGTGTGGCAGCATTGTTGGGACAAGGAGGGTCAAAAAGATATGGATTAACGTGGAGATGGTTACGATTTTTTAAGAATGACCGTGATCGACGGGATCTTATAATATGTGGCTCAGCAGCTGGTATTGCTGCTGCTTTCCGTGCCCCCGTTGGCGGAGTGTTGTTTGCTCTTGAAGAGATGGCATCTTGGTGGAGAACTGCCCTTCTATGGAGAGCTTTCTTTACAACAGCGACAGTTGCCATTTTCCTTCGAGCTATGATTGATGTGTGTTTAAGCGGTAAATGTGGATTATTCGGTAAAGGAGGACTGATAATGTTTAATGCATATTCAGCAAGTATTTCATACCATTTGGGAGATGTTCCTCCTGTGTTTATTCTTGCTGTTGTAGGAGGGCTACTTGGAAGCTTATATAATTTTATGACGAACAAAGTTCTTCGGATGTACAATGTTATCAACGAGAAAGGAATCATTTGCAAACTTTTGCTTGCTTGTTTAATCTCCATCATTACATCATGTCTACTTTTTGGATTACCATGGTTTGCATCTTGCCGACCTTGTCCTCTCGATGCAGTCGAGCCTTGCCCAACAATAGGTCGATCCGGTATCTACAAGAAATTCCAATGCGCTCCTAATCACTATAACGGCCTTGCCAGCCTCATTTTTAACACGAACGATGATGCTATCAGAAATCTATTTAGCATGAACACTGACAACGAGTTTGAGTTTTCTTCGATGTTAATTTTTTTCACCACATGTCTCTTTTTAAGTATCTTTAGCTGTGGAATTGTTGCCCCTGTTGGTCTCTTTGTGCCAATTATCGTGACTGGTGCATCATATGGACGCATGGTTGGAATATTGGTTGGAAACGGGTCCAATCTTAGCCATGGCCTTTATGCTGTACTTGGTGCTGCTTCTCTTCTTGGTGGATCTATGCGGACGACGGTTTCACTATGTGTAATTATTCTAGAGCTGACCAATAATTTGTTATTGCTACCCCTAATAATGATGGTGCTTTTGGTGTCTAAGAGTGTAGCAAATATTTTCAATGCAAATGTATATGACCTTATAATGAAAGCCAAGGGTTTGCCTTATTTAGAAACTCACGCCGAACCATATATGAGGCAGCTAACAGTAGGTGATGTAGTCACAGGCCCGCTCCAAATGTTCAATGGCATCGAGAAGGTTCGCAACATCATGTTTGTCCTCAGAACTACAACACACAATGGATTTCCTGTTATCGACGAGCCTCGACATTCCGAAGCTCCAGTTTTATTTGGTATAATCCTTCGCGACCATCTTCTAACATTGTTAAAGAAGAAAGCTTTCTTGCCTGCGCCTGTGGTGGAAAATAGTTACGATGTCTTGAGAGAGTTTTCAGCCGATGATTTTGCAAAGAAGGGTTCAGGCGAACGTATTAAGATTGAGGATATACAGTTAACAGATGAAGAGATGGGAATGTTCATCGATCTACATCCTTTTACTAATGCTTCGCCTTACACTGTTGTGGAAACAATGTCACTGGCAAAGGCCCTTATACTTTTTCGAGAGGTCGGTTTAAGGCACTTGCTTGTGATACCCAAGATCCCTGGTAGATGGCCGGTGGTTGGTATATTGACGCGGCACGATTTCATGCCAGAACATATATTGGGTATGCATCCATTTCTGGTAAGAAGCAGGTGGAAAAGATTAAGATTTTGGCAAACATTAATAGAAAAAATTCTTTCTGGCATATGA 2334 0.3873 MSNNHLSNGDFETHLRHPLLSSQRSIINSTSQVAIVGANVCPIESLDYEIFENEFFKQDWRSRGVVQIFQYICMKWLLCFMIGMIVGLVGFCNNLAVENLAGIKFVITSNMMLERRFLLAFVIFFASNLSLTLFASIITAFIAPTAAGSGISEVKAYLNGVDAPGIFTVRTLFIKIIGSITAVSSSLVVGKAGPMVHTGACVAALLGQGGSKRYGLTWRWLRFFKNDRDRRDLIICGSAAGIAAAFRAPVGGVLFALEEMASWWRTALLWRAFFTTATVAIFLRAMIDVCLSGKCGLFGKGGLIMFNAYSASISYHLGDVPPVFILAVVGGLLGSLYNFMTNKVLRMYNVINEKGIICKLLLACLISIITSCLLFGLPWFASCRPCPLDAVEPCPTIGRSGIYKKFQCAPNHYNGLASLIFNTNDDAIRNLFSMNTDNEFEFSSMLIFFTTCLFLSIFSCGIVAPVGLFVPIIVTGASYGRMVGILVGNGSNLSHGLYAVLGAASLLGGSMRTTVSLCVIILELTNNLLLLPLIMMVLLVSKSVANIFNANVYDLIMKAKGLPYLETHAEPYMRQLTVGDVVTGPLQMFNGIEKVRNIMFVLRTTTHNGFPVIDEPRHSEAPVLFGIILRDHLLTLLKKKAFLPAPVVENSYDVLREFSADDFAKKGSGERIKIEDIQLTDEEMGMFIDLHPFTNASPYTVVETMSLAKALILFREVGLRHLLVIPKIPGRWPVVGILTRHDFMPEHILGMHPFLVRSRWKRLRFWQTLIEKILSGI 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00714 777 Pfam Voltage gated chloride channel 132 545 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 Gene3D - 565 745 IPR046342 -
Car07g00714 777 PRINTS Chloride channel signature 144 161 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Chloride channel signature 175 194 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Chloride channel signature 239 258 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Chloride channel signature 464 484 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Chloride channel signature 496 512 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Chloride channel signature 514 533 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Chloride channel signature 552 566 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car07g00714 777 PRINTS Plant CLC chloride channel signature 49 57 IPR002251 GO:0005247|GO:0006821|GO:0016020
Car07g00714 777 PRINTS Plant CLC chloride channel signature 260 268 IPR002251 GO:0005247|GO:0006821|GO:0016020
Car07g00714 777 PRINTS Plant CLC chloride channel signature 274 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Car07g00714 777 PRINTS Plant CLC chloride channel signature 292 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Car07g00714 777 PRINTS Plant CLC chloride channel signature 416 432 IPR002251 GO:0005247|GO:0006821|GO:0016020
Car07g00714 777 SUPERFAMILY CBS-domain pair 568 744 IPR046342 -
Car07g00714 777 PANTHER CHLORIDE CHANNEL PROTEIN 12 768 - -
Car07g00714 777 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 12 768 - -
Car07g00714 777 ProSiteProfiles CBS domain profile. 693 754 IPR000644 -
Car07g00714 777 SUPERFAMILY Clc chloride channel 53 567 IPR014743 -
Car07g00714 777 Pfam CBS domain 697 743 IPR000644 -
Car07g00714 777 CDD CBS_pair_voltage-gated_CLC_euk_bac 568 746 - -
Car07g00714 777 Gene3D Clc chloride channel 67 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00714 Car-Chr7 6228796 6233591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00714 6 764 Ion Channels AT5G33280 74.308 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00714 K05016 - gmx:100817901 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00714 07 6228796 6233591 Car07g00714 07 6228796 6233591 ECH