Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00689 ATGGGGAAGAAAAAGAAGGTAGTAGGAGGAGAAACAAATGAAGATGGTGTAGGAAATAGCATTAGCATCCCCGTATCGAATTACAATGACACTATATCATTTATATCCATGTCTAAAGAGTTGAAGGATGAAGGAAATAAGCTGTTCCAAAAGAGAGACCTAGAAGGAGCTATACTAAAATATCAGAAAGCCCTAAAATTGCTTCCAAGAAATCATATCGATGTGTCCTATCTGCGGAGTAACATGGCTTCTTGTTATATGCAGATGGGACTCGTCGAGTATTCAAGGGCAATTCACGAATGCGATTTGGCTCTCGAAGTAATGCCGAATTATAGTATAGCAATGTTGAAGAGGGCAAGGTGTTATGAAGCTTTAAATAGGCTGGATTTAGCTTTGAGAGATGTTGGTACTGTTGTGAAGATGGATCCAAATAATACAATGGCATTGGAGATCTTAGAAAGGGTGAAAAATGCACTTGAGGAGAAAGGATTGAGAGTGAACGATACGAAAATTGAGTTACCTCTGGATTATGTTGAACCACCTAATGCTTTGCCTCCGGAAAAGGCAGCGAAAGAGAAGGCACGCAAGAAGAAGAGCAATAAAGAGGAAGAAAAGCCTGTTAATAACAAAATTCTAGAAAAGAATGCTGAGGAAAAATTCGAAGAGATGATGAAGACTGACGAAACTATTGTAGTCTTAGAGAAGAAAACTAGCAAATCCAAAAAGAAGAAGGCAAAGGGAAAAATTGATGAGAATGAGGTTGATACTAAGGAAATCATAGAGGAGAAAAGTAATGGTAGAAAGAAAGATGTACCTAAGAAAACAACAAAACTTATTTTTGGCGATGACATAAGATGCACTAAATTACCTGTTAATTGTACCCTCTTGCAGTTACGAGAAGTTATTTGTGACAAATTCGCAAGCCTAGGAGCTGTTCTTGTCAAATACAAAGACCAAGAAGGTGATTTGGTTACAATCACTTGTGATGATGAGTTAAAATGGGCTGAAATGGGATCTCACGGTTCTATCCGACTGTACATAGTAGAAGCTACTCCTCAGATGGATCCATTATTCGAGAAACATAAAGCAAATGAGGGGGGAATTTGTGTCAACAGTGCATTTGAGAATGGTTGTGTGAGAAAAGTAAGGGAAATTAATATCTCATCTTGCATTGAGGATTGGATTATTCACTTTGCTGAACTTTTCAAGAACCATGTTCGGTTTGAATCTGACAAATATTTAGATTTTCATGAACTTGGGGTGAAGCTCTCTAATGAGGCTTTGGATGAGACAGTTACAAGTGAAGAAGCACAAGGCCTATTTGACATGGCAGGAGATAAGTTTCAAGAGATGGCTGCTCTAGCACTGTTTAACTGGGGAAACGTGCATATGTCTAGGGCAAGGAAGAAAGCATATTTCACAGAAGATTCTTCACAGGAGAATCTACATGAACAAATCATAAGTTCATTTGAGTGGACACAGAAAGAGTACGTGAAAGCCGGGGAAAAATATGAAGCAGCCATTAACATGAAGTCAGATTTTTATGAAGGCTTCCTTGCACTAGGCCAGCAGCAGTTTGAGCAAGCGAAACTTGCTTGGTATCATGCACTCATTAGTAATGTAAATTTAGTTGCATGGCCTTCCACCGAGGTTTTTCAGCTGTACAACAAGGCTGACGATAATATGAAGAAAGGAATGCAGATGTGGGGAAAATCAGAAGAGCGGCACCGGAATAAAAACTCTAATTCAACCAACGTTGGATTAAATTTGCAGAAGATGGAGTTGGATGAGGTTTTGGAAAATATATCCTCTGATGAAATTGCTACACAAGAGGCAAATATGAGGTCTCAAATAAATCTCCAATGGGGCTTCATGTTGTATGAAAAGTCAATTACAGAATTCAAATTAGGGCTATCGACATGGCATGAATCGCTGGAAGTTGCAGTTGAGAAGTTTGAACTAGCTGGAGCTTCTCCAACAGATATAGCTGTACTGCTGAAGAACCACTGTTCAAACAATACTGCAGTAGATGGTGTGGCATCCAACATTGATGAAATCGTACAGGCATGGAATGAGATGTACAAAGCTAAAAAGTGGCATGATGGAGTTCCATCATTTCGTTTGGAACCGTTATTTAGAAGGAGAGTTTCAAGAATTTATCGTGCTTTCGAGCTTACATAG 2181 0.3897 MGKKKKVVGGETNEDGVGNSISIPVSNYNDTISFISMSKELKDEGNKLFQKRDLEGAILKYQKALKLLPRNHIDVSYLRSNMASCYMQMGLVEYSRAIHECDLALEVMPNYSIAMLKRARCYEALNRLDLALRDVGTVVKMDPNNTMALEILERVKNALEEKGLRVNDTKIELPLDYVEPPNALPPEKAAKEKARKKKSNKEEEKPVNNKILEKNAEEKFEEMMKTDETIVVLEKKTSKSKKKKAKGKIDENEVDTKEIIEEKSNGRKKDVPKKTTKLIFGDDIRCTKLPVNCTLLQLREVICDKFASLGAVLVKYKDQEGDLVTITCDDELKWAEMGSHGSIRLYIVEATPQMDPLFEKHKANEGGICVNSAFENGCVRKVREINISSCIEDWIIHFAELFKNHVRFESDKYLDFHELGVKLSNEALDETVTSEEAQGLFDMAGDKFQEMAALALFNWGNVHMSRARKKAYFTEDSSQENLHEQIISSFEWTQKEYVKAGEKYEAAINMKSDFYEGFLALGQQQFEQAKLAWYHALISNVNLVAWPSTEVFQLYNKADDNMKKGMQMWGKSEERHRNKNSNSTNVGLNLQKMELDEVLENISSDEIATQEANMRSQINLQWGFMLYEKSITEFKLGLSTWHESLEVAVEKFELAGASPTDIAVLLKNHCSNNTAVDGVASNIDEIVQAWNEMYKAKKWHDGVPSFRLEPLFRRRVSRIYRAFELT 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00689 726 ProSiteProfiles TPR repeat profile. 38 71 IPR019734 GO:0005515
Car07g00689 726 SUPERFAMILY TPR-like 40 160 IPR011990 GO:0005515
Car07g00689 726 MobiDBLite consensus disorder prediction 177 206 - -
Car07g00689 726 Pfam PB1 domain 275 347 IPR000270 GO:0005515
Car07g00689 726 SUPERFAMILY CAD & PB1 domains 275 358 - -
Car07g00689 726 PANTHER PROTEIN PHOX3 5 725 - -
Car07g00689 726 Gene3D - 274 352 - -
Car07g00689 726 MobiDBLite consensus disorder prediction 186 206 - -
Car07g00689 726 ProSiteProfiles PB1 domain profile. 273 350 IPR000270 GO:0005515
Car07g00689 726 PANTHER PROTEIN CLMP1 5 725 IPR044517 -
Car07g00689 726 SMART tpr_5 38 71 IPR019734 GO:0005515
Car07g00689 726 SMART tpr_5 76 111 IPR019734 GO:0005515
Car07g00689 726 SMART tpr_5 112 145 IPR019734 GO:0005515
Car07g00689 726 CDD PB1 277 347 - -
Car07g00689 726 Gene3D Tetratricopeptide repeat domain 33 172 IPR011990 GO:0005515
Car07g00689 726 SMART PB1_new 273 350 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00689 Car-Chr7 6045897 6049166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00689 35 145 Calmodulin-binding Proteins AT3G25230 28.455 4.67e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00689 - - gmx:100778972 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00689 07 6045897 6049166 Car07g00689 07 6045897 6049166 ECH
Car07g00689 07 6045897 6049166 Car01g01436 01 23477671 23482857 PCT