Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00678 ATGGAGGATACTCACATATGCATTGGAGACTTGGCAAAGAAATTTGGTTATAATGTTGTCAATGAAGAAGCTATTTCCTTTTATGGTGTATTTGATGGACATGGAGGAAAGAGCGCTGCGCAATTTGTTCGTGATCATCTGCCGAGGGTGATTGttgaagatgctgacttccctctggaacttgagaaggtggtcacaaggtcatttttggagactgattcagagtttgcaaaaacatgctctattgagtcttctttatcttctggtacaactgcattaactgcaatcaTATTTGGAAGGTCTTTACTTGTGGCCAATGCTGGGGACTGTCGTGCTATTTTGTCCCGAGCTGGAGGGGCTATAGAAATGTCCAAAGATCACAGGCCCTTATGCATCAAAGAAAGGAAGAGAATTGAGTCGCTTGGCGGATTTGTTGATGATGGTTACTTGAATGGTCAGTTAGGCGTCACGCGTGCTCTAGGTGATTGGCATCTTGAAGGAATGAAGGAAATTAGCGGAAGAAGCGGACCGTTGAGTGCTGAGCCAGAACTTAAATTAATGACATTGACAAAAGAAGACGAATTCTTGATAATTGGAAGTGATGGAATATGGGATGTTTTTCGTAGCCAAAATGCTATAGATTTTGCTAGGAGGAGGCTTCAAGAGCATAATGATGTGAAACAATGTTGCAAGGAAATAATAGGAGAAGCAATAAAGAGAGGAGCAACAGATAATTTAACTGTTGTGATGATATGTTTTCAATCAGATCCACCACCACCTTTGGTTGTAGAAAGGCCTAGAGTTAGAAGAAGCATATCTGCTGAAGGACTTCAGAATCTTAAATGCCTTCTAGAAGGATAG 861 0.3484 MEDTHICIGDLAKKFGYNVVNEEAISFYGVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETDSEFAKTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAILSRAGGAIEMSKDHRPLCIKERKRIESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEISGRSGPLSAEPELKLMTLTKEDEFLIIGSDGIWDVFRSQNAIDFARRRLQEHNDVKQCCKEIIGEAIKRGATDNLTVVMICFQSDPPPPLVVERPRVRRSISAEGLQNLKCLLEG 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00678 286 Pfam Protein phosphatase 2C 1 245 IPR001932 -
Car07g00678 286 ProSiteProfiles PPM-type phosphatase domain profile. 1 253 IPR001932 -
Car07g00678 286 PANTHER PROTEIN PHOSPHATASE 2C 1 274 IPR015655 GO:0004722|GO:0006470
Car07g00678 286 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 274 - -
Car07g00678 286 SMART PP2C_4 2 251 IPR001932 -
Car07g00678 286 CDD PP2Cc 1 253 IPR001932 -
Car07g00678 286 Gene3D - 1 256 IPR036457 -
Car07g00678 286 SUPERFAMILY PP2C-like 1 254 IPR036457 -
Car07g00678 286 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00678 Car-Chr7 5934715 5937080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00678 1 286 PP2C-type Phosphatase Gene Family AT2G25620 61.379 3.05e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00678 K14803 - gmx:100782648 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00678 07 5934715 5937080 Car07g00678 07 5934715 5937080 ECH