Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00676 ATGGGTTCAAGCTCTAGTAGACTCGGCTCTCGCTCTTCTACTCCTCCAAGGCTCAACAATCGCTTCAGATTATCTTCCTTTCTCTGTGGCACCTCCACCTCTCGCACTATTTCTCAGATGGAAGATCAACAATATGAACACCAGGTTAATTCGGCAAGAAATTTTGATGATGAAATTCAGAAAGTCACTGATGAATCGTCATTATTATGTACAGAAGGTAGAATTAGTCGCTGTCCTCATGCTGAAACTTCAACTTCAACCGATACGAGAACAGAGTTACGCGATAATGCTACTGTTGAAGGTTCTTCTAGAAATGTTGGAACAAGTAGTCAGAGGAATTGCTTGTCTGAACATAAGGAATTAGTCCCTCCTTATCAGGTAAGTGCTGGTCATAGTCATCCTGAATCATTAAGTGATAGTAACAACACAGCTAGTACTTCATATGTTGAACAACAATATTCAGTCTCTGTAAATGTTTCTGCTAACAAGGATAGAATCAATAATGTTGATGATCCAGCTGTTAGTGGTGTCTCTCAAATCTCTCACGAGACTGCACGTCCAAGTGGCTCAATCTCTCAAGAGAATGGGAATCCCGGCTATGGTGAGATTTCTGTTGAGAATGACACAGACGCAGAGACATCTGTCCGTAGTTCTTCCGTTCCTGTTTCTCAAGTTTCCGATACAACACCAACTTCTCAAGTGTCAGAAGATGAACCTCGTCACGAGACAATACCGTCAGGTTTAGGTATTCTTGTGTCCAACCGGGAAAGAGGACATGGAAATGATGGTCTACTTCAAGTTGATGTGGTCGCAATATCTTCCAATATTTTGTCTCGCAACAACACAGATGCCGATGATCGTAATGCCAGTAGGGGTGGTAGAAGAAGATTATTTCGTGATGTTATTTCACGAAGTAGTTATAGAAGCCTTGGTGATTCTCCCACCATCCTTTTCTCAACTGGAGGTGCTGATGATTCGGGATCTCAAGATCGGTGGCTTGTTGATTTTGGTGAGGATTTATCAAATGATGGGGTCGGGACACCGTCTGGATATAGGGGGAGTAGAATTCACAGATTGAATGAACGAATGCGACACTCAAGATCTGAGATATGGGAAAGGCTTCGCGGCGGCCTTGATGAGATTGGTCGGTTGAACACTTCGTGTCCATTAGGACTCCATGCAGACGGTATGTGCTCATGTGAATCATTCCCAATGGCTGAGGAATCTAGCGCGCGAGCAAGTATTTCAAGAATAGTCATGCTGGCTGAGGCTCTTTTTGAGGTTTTAACCTTTTCTCGATTGTCATATATATGTTACATATGCCTGGCGGAGTATGAAGATGGGGACCAAATACGAGTTCTTCCTTGCAGGCATGAATATCACATGTCGTGTGTCGATAAGTGGCTGAAGGAAATACACGGTGTATGTCCTCTGTGTCGTGGCAATGTTTGTGGAGGGTTAACAGAGTCGTCAGCACACTCAGAAGTGCAGTCTCAGTGA 1500 0.4367 MGSSSSRLGSRSSTPPRLNNRFRLSSFLCGTSTSRTISQMEDQQYEHQVNSARNFDDEIQKVTDESSLLCTEGRISRCPHAETSTSTDTRTELRDNATVEGSSRNVGTSSQRNCLSEHKELVPPYQVSAGHSHPESLSDSNNTASTSYVEQQYSVSVNVSANKDRINNVDDPAVSGVSQISHETARPSGSISQENGNPGYGEISVENDTDAETSVRSSSVPVSQVSDTTPTSQVSEDEPRHETIPSGLGILVSNRERGHGNDGLLQVDVVAISSNILSRNNTDADDRNASRGGRRRLFRDVISRSSYRSLGDSPTILFSTGGADDSGSQDRWLVDFGEDLSNDGVGTPSGYRGSRIHRLNERMRHSRSEIWERLRGGLDEIGRLNTSCPLGLHADGMCSCESFPMAEESSARASISRIVMLAEALFEVLTFSRLSYICYICLAEYEDGDQIRVLPCRHEYHMSCVDKWLKEIHGVCPLCRGNVCGGLTESSAHSEVQSQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00676 499 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 429 - -
Car07g00676 499 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 438 497 - -
Car07g00676 499 MobiDBLite consensus disorder prediction 79 114 - -
Car07g00676 499 Pfam Ring finger domain 438 480 IPR001841 -
Car07g00676 499 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 429 - -
Car07g00676 499 SUPERFAMILY RING/U-box 434 483 - -
Car07g00676 499 MobiDBLite consensus disorder prediction 172 233 - -
Car07g00676 499 MobiDBLite consensus disorder prediction 131 145 - -
Car07g00676 499 MobiDBLite consensus disorder prediction 164 245 - -
Car07g00676 499 ProSiteProfiles Zinc finger RING-type profile. 438 480 IPR001841 -
Car07g00676 499 SMART ring_2 438 479 IPR001841 -
Car07g00676 499 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 438 497 - -
Car07g00676 499 MobiDBLite consensus disorder prediction 98 114 - -
Car07g00676 499 MobiDBLite consensus disorder prediction 126 145 - -
Car07g00676 499 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 484 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00676 Car-Chr7 5918840 5922447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00676 387 484 C3H Transcription Factor Family AT5G45290 42.177 9.69e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00676 - - gmx:100783604 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00676 07 5918840 5922447 Car07g00676 07 5918840 5922447 ECH