Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00654 ATGGCGGCAACGTCAGAAGCTATTAATCAATTTGATGATTCGATGAAGAAACAAATGGAATCATTTTTGCGGGCTTTTCTTTCAATCAAATCACTGAAAGAGGACAAGACTCCTTGCGAAATTGACGAGGATCTCTTTTTGGGTTCGTTTGGCTCTGCTGCGAACAAAGTAGCTTTGAAAAATGTCAATGTTACTCACATTTTGACTGTGGCTGGGAAATTGGTACCTGTACATCCTGCAGATTTCGTCTATAAAATTATTGATGTTGCTGACAGAGAGGATACCAACATAAAACAATACTTCAATGAGTGTTTTGATTTTATTGACGAAGCCAAAAGAAATGGTGGGTCTGTTTTGGTTCATTGTTTTGCTGGAAGATCAAGGAGTGTGACCATCATTGTGGCATATCTGATGAAGACTTGTGGAATGAGCTTATCTGAAGCTCTGCAACATGTAAAGGACAGAAGACCACAGGCAGCTCCAAATCGTGGTTTCATTTGTCAGCTGGAAGACTTTGAGAAGTCTCTTCTAGGTGAAAACTGCACTAGTCTTAAATAA 558 0.3943 MAATSEAINQFDDSMKKQMESFLRAFLSIKSLKEDKTPCEIDEDLFLGSFGSAANKVALKNVNVTHILTVAGKLVPVHPADFVYKIIDVADREDTNIKQYFNECFDFIDEAKRNGGSVLVHCFAGRSRSVTIIVAYLMKTCGMSLSEALQHVKDRRPQAAPNRGFICQLEDFEKSLLGENCTSLK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00654 185 Gene3D Protein tyrosine phosphatase superfamily 39 185 IPR029021 -
Car07g00654 185 CDD DSP 38 171 - -
Car07g00654 185 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B 21 177 - -
Car07g00654 185 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 99 157 IPR000387 GO:0016311|GO:0016791
Car07g00654 185 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 21 177 - -
Car07g00654 185 SMART dsp_5 37 175 IPR020422 GO:0006470|GO:0008138
Car07g00654 185 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 37 180 IPR029021 -
Car07g00654 185 Pfam Dual specificity phosphatase, catalytic domain 45 174 IPR000340 GO:0008138|GO:0016311
Car07g00654 185 ProSiteProfiles Dual specificity protein phosphatase domain profile. 37 178 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00654 Car-Chr7 5700700 5705009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00654 28 178 Protein tyrosine phosphatase (PTP) family AT3G06110 56.291 2.20e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00654 - - aprc:113847529 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00654 07 5700700 5705009 Car07g00654 07 5700700 5705009 ECH