Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00648 ATGCACGACAATCATAAATGTACTAGAACTTGGATCGCCGCGTGTTTAATTTTTGACATTAAAGGTATAAATTTCATCAATTTGATAAAGAAGAAAAAAAAAATGAATATATTTTCGGTGTCGGGTGCTTGCAAGCCTCCAGTGAGTTTCCAACCGGCACTAATGGATAATTCATTTTTCCACCAACATCGTAAAGAGAAAGTAGTTGTTATAATGGGGGCAACCGGAACCGGCAAATCCAAGTTGGCAATAGACTTAGCAACTCTTTTTCGACCGGCTGAGATTATCAACTCCGACAAAATGCAAGTTTACAAAGGCTTAGACATAACAACAAACAAAGTTACCGAAGAAGAATGTCGTGGGGTCCCACATCATTTACTGGGAACCATTGATCCTAATTCCAATTTTTCATCGAACGAGTTTTGTCACCACGCGACGCTTGCTATTGGTTCCATCGTAGGGAGAGACGGGTTACCTATTATAGCCGGTGGGTCAAACTCGTACATTGATGCTTTGGTCAACCATCACAACGAATTTCGTTCAAGGTACGAATGTTGTTTCCTTTGGTTGGATGTTGCTTTTCCAGTGCTTCATTCTTCTTTGTCAGCACGTGTGTATCGCATGATTGAAGCTGGTCAAATCAAGGAAGTTCGTGAATTTTTTGACGAAAATAATAATGATTACAATAGAGGGATACGAAGGGCCATTGGGGTACCAGAGTTTGACAAGTTTTTCAGAGCTGAATTAGAAGGAAAAACAGACGAAATAACTATGAAAAAGCTTCTAGAAGATGCCATTGATGCTGTCAAGATTAATAACTGCAAGCTCGCAAACAAACAGGTTCAAAAGATTAATAGACTTTATGGTATGTGGAAAAAGAACATGCACCGTATTGATGCCACGGACGTATTACTTAAGAAAGATTGTTGGGAAGATCGTGTTTTGGCAAAGAGTGTTAGAATTGTTCACAAGTTTCTATATGCTGAAACTCGTGTTCCAATCGCTTCTTCTGCCACGGTGGCAACCGTAACCCATTAG 1038 0.3979 MHDNHKCTRTWIAACLIFDIKGINFINLIKKKKKMNIFSVSGACKPPVSFQPALMDNSFFHQHRKEKVVVIMGATGTGKSKLAIDLATLFRPAEIINSDKMQVYKGLDITTNKVTEEECRGVPHHLLGTIDPNSNFSSNEFCHHATLAIGSIVGRDGLPIIAGGSNSYIDALVNHHNEFRSRYECCFLWLDVAFPVLHSSLSARVYRMIEAGQIKEVREFFDENNNDYNRGIRRAIGVPEFDKFFRAELEGKTDEITMKKLLEDAIDAVKINNCKLANKQVQKINRLYGMWKKNMHRIDATDVLLKKDCWEDRVLAKSVRIVHKFLYAETRVPIASSATVATVTH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00648 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 181 IPR027417 -
Car07g00648 345 Gene3D - 65 326 IPR027417 -
Car07g00648 345 Pfam IPP transferase 178 282 - -
Car07g00648 345 Pfam IPP transferase 102 176 - -
Car07g00648 345 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 194 295 - -
Car07g00648 345 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 57 330 IPR039657 -
Car07g00648 345 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 57 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00648 Car-Chr7 5632060 5635607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00648 181 330 C2H2 Transcription Factor Family AT2G27760 31.073 7.99e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00648 K10760 - gmx:100778430 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00648 07 5632060 5635607 Car07g00648 07 5632060 5635607 ECH