Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00647 ATGGCACTGGAAGAACTTGCATGTTGTAAACCCCAAATTGAATTGCTTCCGCGGCTTGGAAAATGGAAGCAATCTGTGTCGAGAATCAATTTTTCATTATCAAATTTAGCTTCCATCGCTCTTCCCAATGCACCTTATCCAAGGTTTTGCTGCAGAGCCGCCTCCACCTCAGAGTCTTCTGTCGAATATACTATTCCTTCTTCTTCAACCAAAATCTTCATCAAAGGGCTTCCTCTCTCAATCTCTGAAGTGCGTTTAACGAAAGTGTTTTCGGGGTTCGGTGAAGTTACTCAAGTGAAGATTTTAATAGATAAAGAATCTGGACAATCTCTAGGATTTGCATATATTTCCTTTGACAAGGAAGAATCTGCGCAGTTGGCTGCAAAAGAGATGAATGGAAAGTTTTTTGATGGCAGGTTTATTTATGTTTCAATTGCAAAGCCTGGATCATCAAAAAGTTGGAAGAGGACAACAGCTTACAAATTTTAA 489 0.3947 MALEELACCKPQIELLPRLGKWKQSVSRINFSLSNLASIALPNAPYPRFCCRAASTSESSVEYTIPSSSTKIFIKGLPLSISEVRLTKVFSGFGEVTQVKILIDKESGQSLGFAYISFDKEESAQLAAKEMNGKFFDGRFIYVSIAKPGSSKSWKRTTAYKF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00647 162 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 141 IPR000504 GO:0003723
Car07g00647 162 SMART rrm1_1 71 144 IPR000504 GO:0003723
Car07g00647 162 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 35 162 - -
Car07g00647 162 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 70 148 IPR000504 GO:0003723
Car07g00647 162 SUPERFAMILY RNA-binding domain, RBD 65 154 IPR035979 GO:0003676
Car07g00647 162 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 35 162 - -
Car07g00647 162 Gene3D - 52 159 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00647 Car-Chr7 5621478 5623582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00647 68 152 Eukaryotic Initiation Factors Gene Family AT1G71770 30.588 1.05e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00647 07 5621478 5623582 Car07g00647 07 5621478 5623582 ECH