Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00642 ATGCCTCCTGATCAGAGAAAAAAGTCATCTATAGACGTAGACTTCTTTACCGAATATGGTGAAGGGAGTAGATACATGATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTGGTTTGTTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTCGAACATGTTTCTGATGCTACTCGCATTCTTCGTGAGATCAAGCTTCTTAGACTTCTACGTCATCCTGATATTGTAGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGACATATATGTTGTTTTTGAATTAATGGAATCAGATTTACATCAAGTCATCAAAGCAAATGATGACTTGACTCCAGAGCATTACCAATTTTTTCTCTATCAGCTTCTACGGGGTTTGAAGTATATACATACAGCAAATGTTTTTCACCGTGATCTAAAGCCGAAAAACATTTTAGCGAATGCTGACTGCAAATTGAAGATTTGCGACTTCGGTCTTGCCAGAGTGGCTTTCAATGATACACCCACTGCTATCTTCTGGACAGATTATATTGCAACAAGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCCATAGACATATGGAGCATTGGCTGCATTTTCGCGGAACTCTTAACTGGAAAACCGCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACATCATGACTGATTTTCTTGGAACACCATCTCTTGAAGCTATTGCTAGGATACGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCCCAAAAGTTTCCTAATGCAGACCCCCTCGCTCTTCGTGTATTAGAAAGAATGTTAGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCGGATCCTTATTTTAAAGGCTTGGCCAAGTTTGAGAGAGAGCCTTGTGCTCAGCCAGTTAGCAAGATGGAATTTGAATTTGAGAGGCGCAGGGTAACAAAGGAAGACGTGCGAGAGCTTATCTACAGAGAGATTTTGGAGTACCATCCGAAGATGTTAAAGGAACATCTAGAAGGAGCAGAGCCAACAGGATTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATACCTTGAGGAGCATTATGGAAAAGGTGGAACTATTAGTCCACTTGATAGGCAACATGCATCATTACCCAGGCAGTGTGTGTTGTATTCAGACGATTCAAGACAGAATATGGCCGAGGTTGCAGCAGATGATCTCTCCAAGTGTTGTATCAAAGAAGTTGAGAAGCCGACCATTGATAGGACTGGAGTTGTCCCTATGAACAGGCTTCCGCTACTAGCCCCTCAAAATATTCAAGGAGTGATGACTGATATATGTGTTGCTGCACGGCCTAGAAAAGTTGCTGGTTCCGCATTGCATTACAGCCGTGGGGTAGCAGGGTCTGAGCAGCGGAGGACGATTAGAAATCCATCTGTTGCAGTCCAGTATGCTGCTTCAAGCTGTTCATATCCTAAGAGGAATCCAAGCTGTAAAAATGAGAGAGCAGAAGATGGCATTGAGAGTTCAAATGGACTTCAGTCGAAGCCTCAATACATAGCACAAAAAGTtgctgctgctgctgctcatggtggagctgGCGGTAACTGGTAG 1698 0.4176 MPPDQRKKSSIDVDFFTEYGEGSRYMIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYIATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDFLGTPSLEAIARIRNEKARRYLSSMRKKKPVPFSQKFPNADPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKFEREPCAQPVSKMEFEFERRRVTKEDVRELIYREILEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTISPLDRQHASLPRQCVLYSDDSRQNMAEVAADDLSKCCIKEVEKPTIDRTGVVPMNRLPLLAPQNIQGVMTDICVAARPRKVAGSALHYSRGVAGSEQRRTIRNPSVAVQYAASSCSYPKRNPSCKNERAEDGIESSNGLQSKPQYIAQKVAAAAAHGGAGGNW 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00642 565 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00642 565 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car07g00642 565 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00642 565 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Car07g00642 565 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Car07g00642 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Car07g00642 565 MobiDBLite consensus disorder prediction 520 541 - -
Car07g00642 565 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Car07g00642 565 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Car07g00642 565 CDD STKc_TDY_MAPK 24 361 - -
Car07g00642 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Car07g00642 565 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00642 Car-Chr7 5555428 5561858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00642 1 555 MAP Kinase Gene Family AT5G19010 76.532 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car07g00642 Pkinase 8.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00642 - K04371 gmx:100799442 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00642 07 5555428 5561858 Car07g00642 07 5555428 5561858 ECH
Car07g00642 07 5555428 5561858 Car01g00601 01 4959327 4965657 PCT