Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00628 ATGGCTTCCTCTCCACCAAACTCCACCCTTCCTCCTCTCCCAGATCCAcccatcgcattacctctcgctctcccggccccactcccactcccacttgctctcccaccctccacCCGCCGCCTTCCTCCTCCCTGTTGGTCCCCCGACGAAACCCTTGCATTAATCGATTCTTACCGCGACAAATGGTACTCTCTCGGCCGTGGAAACCTAAAAGCCACTCACTGGCAAGAGGTTGCTGACGCTGTTTCCCAGCGTTGCCCTAACGCTTCTCCGTCGAAAACTCCCGTTCAGTGTCGCCATAAGATGGAGAAGCTTCGTAAGCGCTACCGTACTGAGATCCAACGCGCTCGATCACTGCCTGTGTCTCGCTTTAACTCTTCTTGGGTTCACTTCAAACTCATGGATTCCATGGAGAAAGGTCCTTCTCCTGTTAAACCTGAAAACgattccgatagtcccgacgatgacgaagaagatgatcacgatcaagaTCTGTACGAGGAGATAAAAAACGGTCATGGATCTAACACCAGGAGCATCAATAAGCTGTATAAGAACGGGTATGGAAGCggtgttggtgttggtatcggtggcggtgttggtgGCGGGTATAGGATTAGGTTTCCGACTGCACAACCTGAGTTCAAGTTTGGTTCTGAACAGAAATAtaaccctaaccctaaccctaatcctaatctgaatcATCACTATGGGACACCGATGGCGGCGGCAACGACAATGACGAAGGTGTTGGGGAATAAGAGGGAGAGAGATCCTTTGGGAGAGATTGTATCGGCGATTAAGTTATTGggagatgggtttgtgagaatggagcaaatgaagatggagatggctagggagattgaaggtatgcgaatggagatggaaatgaagCGAACTGAGATGATTCTTGAATCACAACAGAGGATTGTGGAGGCATTCGCCAAGGCGGTTTCTGACAATGACGATTACAACTACAACAACAATAGCAAGAAGCCTATTAATAAGAGAATTCCATCACCACAACAACCCTAA 1035 0.3604 MASSPPNSTLPPLPDPPIALPLALPAPLPLPLALPPSTRRLPPPCWSPDETLALIDSYRDKWYSLGRGNLKATHWQEVADAVSQRCPNASPSKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKLMDSMEKGPSPVKPENDSDSPDDDEEDDHDQDLYEEIKNGHGSNTRSINKLYKNGYGSGVGVGIGGGVGGGYRIRFPTAQPEFKFGSEQKYNPNPNPNPNLNHHYGTPMAAATTMTKVLGNKRERDPLGEIVSAIKLLGDGFVRMEQMKMEMAREIEGMRMEMEMKRTEMILESQQRIVEAFAKAVSDNDDYNYNNNSKKPINKRIPSPQQP 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00628 344 PANTHER TRANSCRIPTION FACTOR 7 325 - -
Car07g00628 344 Pfam Myb/SANT-like DNA-binding domain 44 137 IPR044822 -
Car07g00628 344 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 7 325 IPR044823 -
Car07g00628 344 Gene3D - 46 111 - -
Car07g00628 344 ProSiteProfiles Myb-like domain profile. 46 106 IPR001005 -
Car07g00628 344 SMART 118neu2 53 142 IPR006578 -
Car07g00628 344 Coils Coil 99 119 - -
Car07g00628 344 MobiDBLite consensus disorder prediction 321 344 - -
Car07g00628 344 MobiDBLite consensus disorder prediction 135 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00628 Car-Chr7 5454596 5456228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00628 2 137 Trihelix Transcription Factor Family AT3G14180 31.973 3.44e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car07g00628 Myb_DNA-bind_4 2.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00628 - - vun:114179736 369.007