Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00602 ATGGAAGAAAACACAAAGAACAATATCGATCCTTCTTCAACCATTTCTGAAATGGGTAACAGAAAACGTGTTCGACCATTGGGTGCAAAAAGAGATGAAGTTCATAATATTGAACGCGAAAGAAGGAAGAAAATTACTCAAATGTTCACTCACCTTAGAACCACTGTCCCCAGTGTTTTTCCTAAGGCTACAAGAGAAGTGATATTAAATGAAACAATTGAGTACATTAAGGAACTTGAGAAGAAAAAGAAAATGTTGGAGGATCTGAAGGAGAAAATGAAATCGGTTGAAGCGAATTTGAATTTGTTGATTCCGTGCGGTAACAGGAATAATAGCTCTGTTATGGTTACTGTTTCTAGTAATGTAGCTTTTTTTGGAATTCAATCCGTGGCTAAACCTGGATTGGTTACGGTGATTTTGAAGGTGTTCTATAACAATCAAGCTGAGATTTTAGCTGCAAATGTTTCTGTTGATCATGGGAATTTGATCTTGGCGATTACGGCGTTGATTCAACATCGTCATGGAAATAGTGCTACTGTTGAGAAGATTAAGAGAGAGATTTTGAGCTTATAG 573 0.3665 MEENTKNNIDPSSTISEMGNRKRVRPLGAKRDEVHNIERERRKKITQMFTHLRTTVPSVFPKATREVILNETIEYIKELEKKKKMLEDLKEKMKSVEANLNLLIPCGNRNNSSVMVTVSSNVAFFGIQSVAKPGLVTVILKVFYNNQAEILAANVSVDHGNLILAITALIQHRHGNSATVEKIKREILSL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00602 190 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 189 - -
Car07g00602 190 Coils Coil 69 99 - -
Car07g00602 190 Pfam Helix-loop-helix DNA-binding domain 36 80 IPR011598 GO:0046983
Car07g00602 190 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 29 79 IPR011598 GO:0046983
Car07g00602 190 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 8 189 - -
Car07g00602 190 Gene3D - 28 106 IPR036638 GO:0046983
Car07g00602 190 MobiDBLite consensus disorder prediction 1 27 - -
Car07g00602 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 94 IPR036638 GO:0046983
Car07g00602 190 SMART finulus 35 85 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00602 13 88 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46510 40.506 4.63e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car07g00602 HLH 2.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00602 - - cam:101491921 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00602 07 5272638 5273343 Car07g00602 07 5272638 5273343 ECH